LOCUS AEE79380.1 533 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana methionyl-tRNA synthetase / methionine-
tRNA ligase / MetRS (cpMetRS) protein.
ACCESSION CP002686-7927
PROTEIN_ID AEE79380.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="OVA1"
/locus_tag="AT3G55400"
/gene_synonym="OVULE ABORTION 1"
/inference="Similar to RNA sequence,
EST:INSD:BP778041.1,INSD:EH886153.1,INSD:ES024650.1,
INSD:BP591699.1,INSD:DR371000.1,INSD:EL169891.1,
INSD:AV795655.1,INSD:BP596347.1,INSD:AV797343.1,
INSD:BX836736.1,INSD:EL241445.1,INSD:EH836487.1,
INSD:F19929.1,INSD:BX841173.1,INSD:AV817878.1,
INSD:AV802196.1,INSD:BP783274.1,INSD:EL338252.1,
INSD:AA395001.1,INSD:ES062509.1,INSD:DR372339.1,
INSD:BP793609.1,INSD:BP794469.1,INSD:AV827139.1,
INSD:BX840879.1,INSD:EL188108.1,INSD:BX839974.1,
INSD:EH866014.1,INSD:DR367978.1,INSD:ES123973.1,
INSD:EG472338.1"
/note="OVULE ABORTION 1 (OVA1); FUNCTIONS IN:
methionine-tRNA ligase activity, aminoacyl-tRNA ligase
activity, ATP binding; INVOLVED IN: tRNA aminoacylation
for protein translation, ovule development; LOCATED IN:
mitochondrion, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich
fold (InterPro:IPR014729), Methionyl-tRNA synthetase,
class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA
synthetase, class I (M) (InterPro:IPR015413),
Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304),
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
(InterPro:IPR009080); BEST Arabidopsis thaliana protein
match is: methionine--tRNA ligase, putative /
methionyl-tRNA synthetase, putative / MetRS, putative
(TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins
in 3001 species: Archae - 930; Bacteria - 15835; Metazoa -
410; Fungi - 530; Plants - 181; Viruses - 3; Other
Eukaryotes - 7011 (source: NCBI BLink)."
/db_xref="TAIR:AT3G55400"
/db_xref="Araport:AT3G55400"
intron_pos 103:0 (1/8)
intron_pos 201:0 (2/8)
intron_pos 257:0 (3/8)
intron_pos 298:2 (4/8)
intron_pos 330:0 (5/8)
intron_pos 363:0 (6/8)
intron_pos 423:1 (7/8)
intron_pos 462:0 (8/8)
BEGIN
1 MAARINTSLH NALSFLKPFN TPLNTKPFSF RRNSFRFSKK LPYYSQFSSG KRALYCTSSS
61 QESTVDEGET FVLTTPLYYV NAPPHMGSAY TTIAADSIAR FQRLLGKKVI FITGTDEHGE
121 KIATSAAANG RNPPEHCDLI SQSYRTLWKD LDIAYDKFIR TTDPKHEAIV KEFYARVFAN
181 GDIYRADYEG LYCVNCEEYK DEKELLENNC CPVHQMPCVA RKEDNYFFAL SKYQKPLEDI
241 LAQNPRFVQP SYRLNEVQSW IKSGLRDFSI SRALVDWGIP VPDDDKQTIY VWFDALLGYI
301 SALTEDNKQQ NLETAVSFGW PASLHLIGKD ILRFHAVYWP AMLMSAGLEL PKMVFGHGFL
361 TKDGMKMGKS LGNTLEPFEL VQKFGPDAVR YFFLREVEFG NDGDYSEDRF IKIVNAHLAN
421 TIGNLLNRTL GLLKKNCEST LVVDSTVAAE GVPLKDTVEK LVEKARTNYE NLSLSSACEA
481 VLEIGNAGNT YMDQRAPWFL FKQGGVSAEE AAKVLFRFPN CHSSYKTKDL LPI
//