LOCUS AEE79378.1 194 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Uncharacterized protein family (UPF0497)
protein.
ACCESSION CP002686-7925
PROTEIN_ID AEE79378.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G55390"
/gene_synonym="CASP-like protein 4C1"
/gene_synonym="CASPL4C1"
/inference="Similar to RNA sequence,
EST:INSD:BP778041.1,INSD:ES024650.1,INSD:BP591699.1,
INSD:DR371000.1,INSD:EL240883.1,INSD:AV795655.1,
INSD:BP596347.1,INSD:DR310728.1,INSD:AV542290.1,
INSD:DR310730.1,INSD:DR310723.1,INSD:AV797343.1,
INSD:DR310726.1,INSD:BX836736.1,INSD:DR383223.1,
INSD:DR310729.1,INSD:AV817878.1,INSD:AV802196.1,
INSD:BP783274.1,INSD:DR310727.1,INSD:DR310725.1,
INSD:EL997182.1,INSD:AA395001.1,INSD:ES062509.1,
INSD:EL998548.1,INSD:ES186695.1,INSD:DR310731.1,
INSD:DR310724.1,INSD:BP793609.1,INSD:BP794469.1,
INSD:ES070114.1,INSD:ES065582.1,INSD:EL229840.1,
INSD:ES123973.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT024913.1,INSD:AY088394.1"
/note="Uncharacterised protein family (UPF0497); CONTAINS
InterPro DOMAIN/s: Uncharacterised protein family UPF0497,
trans-membrane plant (InterPro:IPR006702), Uncharacterised
protein family UPF0497, trans-membrane plant subgroup
(InterPro:IPR006459); BEST Arabidopsis thaliana protein
match is: Uncharacterised protein family (UPF0497)
(TAIR:AT2G38480.1); Has 361 Blast hits to 361 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 361; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G55390"
/db_xref="Araport:AT3G55390"
intron_pos 74:2 (1/2)
intron_pos 120:0 (2/2)
BEGIN
1 MRSPHAFRNG ESPTLRDHTH FHSTVTAQKL RRFNSLILLL RLASFSFSLA SAVFMLTNSR
61 GSASPHWYDF DAFRFVFVAN AIVALYSVFE MGTCVWEFSR ETTLWPEAFQ VWFDFGHDQV
121 FSYLLLSAGS AAAALARTMR GGDTCTANKA FCLQSDVAIG LGFAAFLFLA FSSCFSGFRV
181 ACFLITGSRF HLYS
//