LOCUS AEE79363.1 154 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosomal protein L23AB protein.
ACCESSION CP002686-7910
PROTEIN_ID AEE79363.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RPL23AB"
/locus_tag="AT3G55280"
/gene_synonym="RIBOSOMAL PROTEIN L23A2"
/gene_synonym="ribosomal protein L23AB"
/gene_synonym="RPL23A2"
/inference="Similar to RNA sequence,
EST:INSD:EL989097.1,INSD:ES134408.1,INSD:BP790917.1,
INSD:EG506645.1,INSD:ES126963.1,INSD:AI100376.1,
INSD:EL273157.1,INSD:ES131352.1,INSD:AV555709.1,
INSD:ES138314.1,INSD:AV787394.1,INSD:EL993638.1,
INSD:EL976726.1,INSD:ES143775.1,INSD:EG506617.1,
INSD:EG505096.1,INSD:ES019189.1,INSD:ES012418.1,
INSD:EL970135.1,INSD:EH896944.1,INSD:EL288653.1,
INSD:ES011770.1,INSD:ES176504.1,INSD:ES214922.1,
INSD:ES129340.1,INSD:ES185178.1,INSD:AV784248.1,
INSD:ES182890.1,INSD:EL270575.1,INSD:AW004250.1,
INSD:EL282297.1,INSD:EL972225.1,INSD:ES078875.1,
INSD:EL059501.1,INSD:ES129740.1,INSD:ES154973.1,
INSD:EH961837.1,INSD:ES184501.1,INSD:EL986688.1,
INSD:EG505262.1,INSD:AV808247.1,INSD:ES088380.1,
INSD:ES044717.1,INSD:ES135378.1,INSD:BP643552.1,
INSD:DR378142.1,INSD:AV544539.1,INSD:EH920519.1,
INSD:EG505114.1,INSD:EG506649.1,INSD:EH884617.1,
INSD:AV544798.1,INSD:EL971589.1,INSD:DR372741.1,
INSD:EL016323.1,INSD:ES120115.1,INSD:EG506621.1,
INSD:EH898080.1,INSD:ES129897.1,INSD:EL023377.1,
INSD:AV792158.1,INSD:EL988939.1,INSD:EL072182.1,
INSD:EL093256.1,INSD:AV552858.1,INSD:ES057684.1,
INSD:DR375541.1,INSD:EL253275.1,INSD:EL096835.1,
INSD:ES036774.1,INSD:CF651661.1,INSD:EL305517.1,
INSD:ES210640.1,INSD:ES125450.1,INSD:EL118616.1,
INSD:ES133103.1,INSD:EL972428.1,INSD:ES105876.1,
INSD:AV553308.1,INSD:EL978579.1,INSD:ES213817.1,
INSD:EG505272.1,INSD:DR273419.1,INSD:EH864438.1,
INSD:ES086830.1,INSD:ES052011.1,INSD:ES004303.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT000478.1"
/note="ribosomal protein L23AB (RPL23AB); FUNCTIONS IN:
structural constituent of ribosome, RNA binding,
nucleotide binding; INVOLVED IN: response to oxidative
stress, response to high light intensity, response to
cold, translation, ribosome biogenesis; LOCATED IN:
cytosolic large ribosomal subunit, intracellular,
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosomal protein L23/L25, conserved site
(InterPro:IPR001014), Ribosomal protein L23/L15e, core
(InterPro:IPR012678), Ribosomal protein L23/L25,
N-terminal (InterPro:IPR005633), Nucleotide-binding,
alpha-beta plait (InterPro:IPR012677), Ribosomal protein
L25/L23 (InterPro:IPR013025), Ribosomal protein L23
(InterPro:IPR019985); BEST Arabidopsis thaliana protein
match is: ribosomal protein L23AA (TAIR:AT2G39460.2); Has
2614 Blast hits to 2614 proteins in 920 species: Archae -
307; Bacteria - 1151; Metazoa - 410; Fungi - 142; Plants -
120; Viruses - 0; Other Eukaryotes - 484 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G55280"
/db_xref="Araport:AT3G55280"
intron_pos 6:1 (1/2)
intron_pos 127:2 (2/2)
BEGIN
1 MSPAKVDVTK KADPKAKALK AAKAVKSGQI VKKPAKKIRT KVTFHRPKTL TVPRKPKYPK
61 ISATPRNKLD HYQILKYPLT TESAMKKIED NNTLVFIVDI RADKKKIKDA VKKMYDIQTK
121 KVNTLIRPDG TKKAYVRLTP DYDALDVANK IGII
//