LOCUS AEE79322.1 851 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002686-7854
PROTEIN_ID AEE79322.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G54980"
/gene_synonym="T15C9.5"
/inference="Similar to RNA sequence,
EST:INSD:EL127974.1,INSD:H36636.1,INSD:EL988010.1,
INSD:ES216043.1,INSD:EL035109.1,INSD:ES083111.1,
INSD:AU227923.1,INSD:AI993780.1,INSD:EL980786.1,
INSD:AV564347.1,INSD:EL081084.1,INSD:AU236918.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT003973.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has
66577 Blast hits to 14412 proteins in 313 species: Archae
- 5; Bacteria - 80; Metazoa - 1084; Fungi - 1336; Plants -
61678; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G54980"
/db_xref="Araport:AT3G54980"
BEGIN
1 MRSLLVFRKI PSRIRLRNLR NNKPFCSQSQ FPKESENPSQ EQRLLVYGST SEENPVTSKV
61 SLLSAKPEQK DDASVIDVLL NRRNNPEAAL RFYNWARPWR GSFEDGDVFW VLIHILVSSP
121 ETYGRASDLL IRYVSTSNPT PMASVLVSKL VDSAKSFGFE VNSRAFNYLL NAYSKDRQTD
181 HAVDIVNQML ELDVIPFFPY VNRTLSALVQ RNSLTEAKEL YSRMVAIGVD GDNVTTQLLM
241 RASLREEKPA EALEVLSRAI ERGAEPDSLL YSLAVQACCK TLDLAMANSL LREMKEKKLC
301 VPSQETYTSV ILASVKQGNM DDAIRLKDEM LSDGISMNVV AATSLITGHC KNNDLVSALV
361 LFDKMEKEGP SPNSVTFSVL IEWFRKNGEM EKALEFYKKM EVLGLTPSVF HVHTIIQGWL
421 KGQKHEEALK LFDESFETGL ANVFVCNTIL SWLCKQGKTD EATELLSKME SRGIGPNVVS
481 YNNVMLGHCR QKNMDLARIV FSNILEKGLK PNNYTYSILI DGCFRNHDEQ NALEVVNHMT
541 SSNIEVNGVV YQTIINGLCK VGQTSKAREL LANMIEEKRL CVSCMSYNSI IDGFFKEGEM
601 DSAVAAYEEM CGNGISPNVI TYTSLMNGLC KNNRMDQALE MRDEMKNKGV KLDIPAYGAL
661 IDGFCKRSNM ESASALFSEL LEEGLNPSQP IYNSLISGFR NLGNMVAALD LYKKMLKDGL
721 RCDLGTYTTL IDGLLKDGNL ILASELYTEM QAVGLVPDEI IYTVIVNGLS KKGQFVKVVK
781 MFEEMKKNNV TPNVLIYNAV IAGHYREGNL DEAFRLHDEM LDKGILPDGA TFDILVSGQV
841 GNLQPVRAAS L
//