LOCUS AEE79317.1 488 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana patatin-like protein 6 protein.
ACCESSION CP002686-7844
PROTEIN_ID AEE79317.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="pPLAIIIbeta"
/locus_tag="AT3G54950"
/gene_synonym="patatin-like protein 6"
/gene_synonym="PATATIN-LIKE PROTEIN 7"
/gene_synonym="patatin-related phospholipase IIIbeta"
/gene_synonym="PLA IIIA"
/gene_synonym="PLP7"
/gene_synonym="T15C9.3"
/inference="Similar to RNA sequence,
EST:INSD:BP804830.1,INSD:BP794955.1,INSD:CB261501.1,
INSD:CD534559.1,INSD:BP634706.1,INSD:CD533538.1,
INSD:DR321913.1,INSD:ES069726.1,INSD:AU237687.1,
INSD:DR370854.1,INSD:DR321912.1,INSD:AV826325.1,
INSD:AV794407.1,INSD:BX839644.1,INSD:AU228769.1,
INSD:CD529710.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080807.1,INSD:AK229196.1"
/note="patatin-like protein 6 (PLA IIIA); CONTAINS
InterPro DOMAIN/s: Acyl transferase/acyl
hydrolase/lysophospholipase (InterPro:IPR016035), Patatin
(InterPro:IPR002641); BEST Arabidopsis thaliana protein
match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has
1058 Blast hits to 1055 proteins in 202 species: Archae -
0; Bacteria - 325; Metazoa - 24; Fungi - 32; Plants - 544;
Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54950"
/db_xref="Araport:AT3G54950"
intron_pos 385:0 (1/1)
BEGIN
1 MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS
61 YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI LSIDGGGMRG ILPGKALAYL
121 EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK
181 GLYGGAGILK RVLRTGSGCC SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL
241 FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301 ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA
361 ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD PSGSNVNMLM GVAEEMLKQK
421 NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD
481 IGVTARER
//