LOCUS AEE79302.1 608 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Sec1/munc18-like (SM) proteins superfamily
protein.
ACCESSION CP002686-7824
PROTEIN_ID AEE79302.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ATVPS33"
/locus_tag="AT3G54860"
/gene_synonym="VACUOLAR PROTEIN SORTING 33"
/gene_synonym="VPS33"
/inference="Similar to RNA sequence,
EST:INSD:ES056175.1,INSD:BP668132.1,INSD:EL118278.1,
INSD:EL167114.1,INSD:ES131305.1,INSD:EL122756.1,
INSD:EH944271.1,INSD:AV812902.1,INSD:BP562340.2,
INSD:ES009676.1,INSD:AV565142.1,INSD:ES158401.1,
INSD:EL173019.1,INSD:BP670842.1,INSD:EH945729.1,
INSD:AV556643.1,INSD:EG517191.1,INSD:EG517192.1,
INSD:EL125676.1,INSD:EL229088.1,INSD:BP843365.1,
INSD:EL160767.1,INSD:BE523719.1,INSD:ES080582.1"
/note="ATVPS33; CONTAINS InterPro DOMAIN/s: Sec1-like
protein (InterPro:IPR001619); BEST Arabidopsis thaliana
protein match is: vacuolar protein sorting 45
(TAIR:AT1G77140.1); Has 1433 Blast hits to 1411 proteins
in 217 species: Archae - 0; Bacteria - 0; Metazoa - 612;
Fungi - 387; Plants - 135; Viruses - 0; Other Eukaryotes -
299 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54860"
/db_xref="Araport:AT3G54860"
intron_pos 18:2 (1/22)
intron_pos 32:0 (2/22)
intron_pos 59:0 (3/22)
intron_pos 124:0 (4/22)
intron_pos 161:0 (5/22)
intron_pos 183:0 (6/22)
intron_pos 219:0 (7/22)
intron_pos 234:0 (8/22)
intron_pos 253:0 (9/22)
intron_pos 284:2 (10/22)
intron_pos 300:2 (11/22)
intron_pos 318:0 (12/22)
intron_pos 336:0 (13/22)
intron_pos 357:0 (14/22)
intron_pos 392:2 (15/22)
intron_pos 433:2 (16/22)
intron_pos 461:0 (17/22)
intron_pos 484:2 (18/22)
intron_pos 511:2 (19/22)
intron_pos 531:0 (20/22)
intron_pos 548:2 (21/22)
intron_pos 580:0 (22/22)
BEGIN
1 MAQIPSLENA PLNLKSIRDK SERELVNLLK DVRGTKCLVI DPKLSGSVSL IIPTSKLKEL
61 GLELRHLTAE PVQTECTKVV YLVRSQLSFM KFIASHIQND IAKAIQRDYY VYFVPRRSVA
121 CEKILEQEKV HNLVTVKEFP LYMVPLDEDV ISFELELSEK DCLVDGDVSS LWHIAKAIHE
181 LEFSFGVISK MRAKGKASVR VADILNRMQV EEPVNSNDVG RPEVDTLILL DREVDMVTPM
241 CSQLTYEGLI DEILHISNGA VEVDSSVMGA QQEGKKMKVP LNSSKYDAWN IYFDFRGLDN
301 DKLFKETRDL NFEVVVQVLR QKAMTMKEDY TEINSTQTVS ELKDFVKKLN SLPEMTRHIH
361 LAQHLTTFTS KQSFNSQLDM EQTLVEAENY DICYEYIEEM IHKQEPLTNV LRLLVLFSVT
421 NSGLPKKQFD YIRMELLHSY GFEHVVTLNN LEKAGLLKKQ EFKSNWLTVK RTLKLIVEDT
481 DTSRPNDIAY VYSGYAPLSI RLIQQAIHSG WRPMEDILKL LPGPHLETKR SGFPSSPSVD
541 SLHGASNGVA DGRRSIVLVV FIGGVTFAEI SALRYLASKE GMAYDLIVAT TKIVNGATLI
601 ETFMEKLG
//