LOCUS AEE79301.1 592 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Sec1/munc18-like (SM) proteins superfamily
protein.
ACCESSION CP002686-7823
PROTEIN_ID AEE79301.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ATVPS33"
/locus_tag="AT3G54860"
/gene_synonym="VACUOLAR PROTEIN SORTING 33"
/gene_synonym="VPS33"
/inference="Similar to RNA sequence,
EST:INSD:ES056175.1,INSD:EL118278.1,INSD:ES131305.1,
INSD:EL122756.1,INSD:AV812902.1,INSD:ES009676.1,
INSD:AV565142.1,INSD:BP670842.1,INSD:EG517191.1,
INSD:AV556643.1,INSD:EL125676.1,INSD:EL160767.1,
INSD:BP843365.1,INSD:ES080582.1,INSD:EL167114.1,
INSD:BP668132.1,INSD:EH944271.1,INSD:BE523956.1,
INSD:BP562340.2,INSD:EL173019.1,INSD:ES158401.1,
INSD:EH945729.1,INSD:EG517192.1,INSD:EL229088.1,
INSD:BE523719.1"
/inference="Similar to RNA sequence, mRNA:INSD:AF357527.1"
/note="ATVPS33; CONTAINS InterPro DOMAIN/s: Sec1-like
protein (InterPro:IPR001619); BEST Arabidopsis thaliana
protein match is: vacuolar protein sorting 45
(TAIR:AT1G77140.1); Has 1699 Blast hits to 1677 proteins
in 225 species: Archae - 0; Bacteria - 0; Metazoa - 761;
Fungi - 432; Plants - 184; Viruses - 0; Other Eukaryotes -
322 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54860"
/db_xref="Araport:AT3G54860"
intron_pos 18:2 (1/21)
intron_pos 32:0 (2/21)
intron_pos 59:0 (3/21)
intron_pos 124:0 (4/21)
intron_pos 161:0 (5/21)
intron_pos 183:0 (6/21)
intron_pos 219:0 (7/21)
intron_pos 234:0 (8/21)
intron_pos 253:0 (9/21)
intron_pos 284:2 (10/21)
intron_pos 302:0 (11/21)
intron_pos 320:0 (12/21)
intron_pos 341:0 (13/21)
intron_pos 376:2 (14/21)
intron_pos 417:2 (15/21)
intron_pos 445:0 (16/21)
intron_pos 468:2 (17/21)
intron_pos 495:2 (18/21)
intron_pos 515:0 (19/21)
intron_pos 532:2 (20/21)
intron_pos 564:0 (21/21)
BEGIN
1 MAQIPSLENA PLNLKSIRDK SERELVNLLK DVRGTKCLVI DPKLSGSVSL IIPTSKLKEL
61 GLELRHLTAE PVQTECTKVV YLVRSQLSFM KFIASHIQND IAKAIQRDYY VYFVPRRSVA
121 CEKILEQEKV HNLVTVKEFP LYMVPLDEDV ISFELELSEK DCLVDGDVSS LWHIAKAIHE
181 LEFSFGVISK MRAKGKASVR VADILNRMQV EEPVNSNDVG RPEVDTLILL DREVDMVTPM
241 CSQLTYEGLI DEILHISNGA VEVDSSVMGA QQEGKKMKVP LNSSDKLFKE TRDLNFEVVV
301 QVLRQKAMTM KEDYTEINST QTVSELKDFV KKLNSLPEMT RHIHLAQHLT TFTSKQSFNS
361 QLDMEQTLVE AENYDICYEY IEEMIHKQEP LTNVLRLLVL FSVTNSGLPK KQFDYIRMEL
421 LHSYGFEHVV TLNNLEKAGL LKKQEFKSNW LTVKRTLKLI VEDTDTSRPN DIAYVYSGYA
481 PLSIRLIQQA IHSGWRPMED ILKLLPGPHL ETKRSGFPSS PSVDSLHGAS NGVADGRRSI
541 VLVVFIGGVT FAEISALRYL ASKEGMAYDL IVATTKIVNG ATLIETFMEK LG
//