LOCUS AEE79299.1 193 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ras-related small GTP-binding family
protein protein.
ACCESSION CP002686-7820
PROTEIN_ID AEE79299.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ARA6"
/locus_tag="AT3G54840"
/gene_synonym="ARA-6"
/gene_synonym="AtARA6"
/gene_synonym="ATRAB5C"
/gene_synonym="ATRABF1"
/gene_synonym="RABF1"
/inference="Similar to RNA sequence,
EST:INSD:AU236272.1,INSD:ES118199.1,INSD:EH817281.1,
INSD:ES172196.1,INSD:DR221932.1,INSD:BP837608.1,
INSD:EL195224.1,INSD:DR221936.1,INSD:EL080913.1,
INSD:EH937595.1,INSD:BP843745.1,INSD:EL202610.1,
INSD:EL142035.1,INSD:DR221933.1,INSD:EH830381.1,
INSD:DR221934.1,INSD:EH884027.1,INSD:ES192357.1,
INSD:EH813931.1,INSD:EL013983.1,INSD:DR221931.1,
INSD:EL967549.1,INSD:ES208655.1,INSD:EH958376.1,
INSD:EH852501.1,INSD:CB254670.1,INSD:DR221930.1,
INSD:BP799239.1,INSD:BP583336.1,INSD:ES132707.1,
INSD:EL155310.1,INSD:ES079413.1,INSD:DR221929.1,
INSD:ES140566.1,INSD:EH851416.1,INSD:ES118583.1,
INSD:EL190064.1,INSD:BP817024.1,INSD:ES119074.1,
INSD:ES103894.1,INSD:ES107716.1,INSD:ES153548.1,
INSD:EH966052.1"
/note="ARA6; CONTAINS InterPro DOMAIN/s: Ras GTPase
(InterPro:IPR001806), Small GTP-binding protein
(InterPro:IPR005225), Small GTPase (InterPro:IPR020851),
Ras (InterPro:IPR013753), Ras small GTPase, Rab type
(InterPro:IPR003579), Rab5-related (InterPro:IPR015599);
BEST Arabidopsis thaliana protein match is: Ras-related
small GTP-binding family protein (TAIR:AT4G19640.1); Has
25937 Blast hits to 25894 proteins in 712 species: Archae
- 24; Bacteria - 131; Metazoa - 13614; Fungi - 3531;
Plants - 2862; Viruses - 20; Other Eukaryotes - 5755
(source: NCBI BLink)."
/db_xref="TAIR:AT3G54840"
/db_xref="Araport:AT3G54840"
intron_pos 9:1 (1/7)
intron_pos 36:0 (2/7)
intron_pos 64:0 (3/7)
intron_pos 95:2 (4/7)
intron_pos 131:0 (5/7)
intron_pos 161:0 (6/7)
intron_pos 190:0 (7/7)
BEGIN
1 MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA
61 TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA PLYYRGAGVA VIVYDITSPE
121 SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT
181 ADNINQLFEC THV
//