LOCUS AEE79294.1 322 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Plant-specific GATA-type zinc finger
transcription factor family protein protein.
ACCESSION CP002686-7814
PROTEIN_ID AEE79294.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="BME3"
/locus_tag="AT3G54810"
/gene_synonym="BLUE MICROPYLAR END 3"
/gene_synonym="BLUE MICROPYLAR END 3-ZINC FINGER"
/gene_synonym="BME3-ZF"
/gene_synonym="GATA TRANSCRIPTION FACTOR 8"
/gene_synonym="GATA8"
/gene_synonym="T5N23.3"
/inference="Similar to RNA sequence,
EST:INSD:CB255483.1,INSD:EH857723.1,INSD:EL281475.1,
INSD:BP661732.1,INSD:EL008744.1,INSD:AV787452.1,
INSD:EL034189.1,INSD:EL237681.1,INSD:CD531098.1,
INSD:EG518923.1,INSD:ES050387.1,INSD:AV824734.1,
INSD:AV544614.1,INSD:DR376879.1,INSD:CB254520.1,
INSD:EL014144.1,INSD:EH805889.1,INSD:AV538301.1,
INSD:ES045880.1,INSD:EH911185.1,INSD:AV546220.1,
INSD:EH986387.1,INSD:EH851917.1,INSD:CB253100.1,
INSD:AA585854.1,INSD:EH954823.1,INSD:EL251829.1,
INSD:EL234379.1,INSD:AV554724.1,INSD:EL195294.1,
INSD:BP848212.1,INSD:AV818608.1,INSD:EL128121.1,
INSD:EL013614.1,INSD:EL023668.1,INSD:EL271733.1,
INSD:BP628306.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY078029.1,INSD:AF412107.1"
/note="BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro
DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088),
Transcription factor, GATA, plant (InterPro:IPR016679),
Zinc finger, GATA-type (InterPro:IPR000679); BEST
Arabidopsis thaliana protein match is: GATA transcription
factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450
proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa
- 58; Fungi - 544; Plants - 806; Viruses - 0; Other
Eukaryotes - 72 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54810"
/db_xref="Araport:AT3G54810"
intron_pos 77:0 (1/1)
BEGIN
1 MIGTSFPEDL DCGNFFDNMD DLMDFPGGDI DVGFGIGDSD SFPTIWTTHH DTWPAASDPL
61 FSSNTNSDSS PELYVPFEDI VKVERPPSFV EETLVEKKED SFSTNTDSSS SHSQFRSSSP
121 VSVLESSSSS SQTTNTTSLV LPGKHGRPRT KRPRPPVQDK DRVKDNVCGG DSRLIIRIPK
181 QFLSDHNKMI NKKKKKKAKI TSSSSSSGID LEVNGNNVDS YSSEQYPLRK CMHCEVTKTP
241 QWRLGPMGPK TLCNACGVRY KSGRLFPEYR PAASPTFTPA LHSNSHKKVA EMRNKRCSDG
301 SYITEENDLQ GLIPNNAYIG VD
//