LOCUS AEE79286.1 633 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002686-7805
PROTEIN_ID AEE79286.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G54780"
/inference="Similar to RNA sequence,
EST:INSD:BX838145.1,INSD:EL171081.1,INSD:AU227757.1,
INSD:AV548792.1,INSD:BX834651.1,INSD:EL020203.1"
/note="Zinc finger (C3HC4-type RING finger) family
protein; FUNCTIONS IN: ubiquitin-protein ligase activity,
zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957), von Willebrand factor,
type A (InterPro:IPR002035); BEST Arabidopsis thaliana
protein match is: Zinc finger (C3HC4-type RING finger)
family protein (TAIR:AT2G38970.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54780"
/db_xref="Araport:AT3G54780"
intron_pos 73:0 (1/2)
intron_pos 365:0 (2/2)
BEGIN
1 MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR
61 RRLSRSSSKS SKQTCSICLN KMKEGCGHAI FTAECSHMFH FHCIASNVKH GNQVCPVCRA
121 KWKEIPIQKP SLDLPYYPFD RCNNDAAISL FRCLPPSQRA ITQGHPEPAT FDDDERLEEQ
181 IVFDGETEVL KKENRDYVRM MDMKVYPEVS AVPQSKSCEN FDVLVHLKAV TGDQISQYRR
241 APIDLVTVLD ISGSMGGTKL ALLKRAMGFV IQNLGSSDRL SVIAFSSTAR RLFPLTRMSD
301 AGRQLALQAV NSLVANGGTN IVDGLRKGAK VMEDRLERNS VASIILLSDG RDTYTTNHPD
361 PSYKDALAQC IGGLLSVAVQ ELRVEIEGVS PNVRLSSIKA GSYSSLVTGD GHSGLVDLGD
421 LYADEERDFL VSINIPVEED GHTPLLKLRC LYINPLTKEI TTLESHVLQI RRPEYVAEEK
481 VVPIEVVRQR NRFLAAEAMA QARTLAEHGD LEAAVKAIEN FRLVLAETVA AKSCDRFCVA
541 LDSELKEMQG RMRSSHMYEA SGRAYILSGL SSHSWQRATA RGNSRDSSSF VQAYQTPSMA
601 EMLRRSQAMF LVSPSHHRLI QPLLSFASQP KPR
//