LOCUS AEE79253.1 699 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxyproline-rich glycoprotein protein.
ACCESSION CP002686-7762
PROTEIN_ID AEE79253.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HRGP1"
/locus_tag="AT3G54590"
/gene_synonym="ATHRGP1"
/gene_synonym="hydroxyproline-rich glycoprotein"
/inference="Similar to RNA sequence,
EST:INSD:AV553912.1,INSD:EL302191.1,INSD:EH846934.1,
INSD:EL335582.1,INSD:EL295641.1,INSD:EH961796.1,
INSD:AV549247.1"
/note="hydroxyproline-rich glycoprotein (HRGP1); FUNCTIONS
IN: structural constituent of cell wall; INVOLVED IN:
plant-type cell wall organization; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST
Arabidopsis thaliana protein match is: Proline-rich
extensin-like family protein (TAIR:AT3G54580.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G54590"
/db_xref="Araport:AT3G54590"
intron_pos 147:0 (1/1)
BEGIN
1 MRSSSKMGPS AHLISALGVI IMATMVAAYE PETYASPPPL YSSPLPEVEY KTPPLPYVDS
61 SPPPTYTPAP EVEYKSPPPP YVYSSPPPPT YSPSPKVDYK SPPPPYVYSS PPPPYYSPSP
121 KVDYKSPPPP YVYNSPPPPY YSPSPKVDYK SPPPPYVYSS PPPPYYSPSP KVEYKSPPPP
181 YVYSSPPPPY YSPSPKVDYK SPPPPYVYSS PPPPYYSPSP KVDYKSPPPP YVYSSPPPPY
241 YSPSPKVDYK SPPPPYVYSS PPPPYYSPSP KVDYKSPPPP YVYSSPPPPY YSPSPKVDYK
301 SPPPPYVYSS PPPPTYSPSP KVDYKSPPPP YVYSSPPPPY YSPSPKVEYK SPPPPYVYSS
361 PPPPTYSPSP KVYYKSPPPP YVYSSPPPPY YSPSPKVYYK SPPPPYVYSS PPPPYYSPSP
421 KVYYKSPPPP YVYSSPPPPY YSPSPKVYYK SPPPPYVYSS PPPPYYSPSP KVYYKSPPPP
481 YVYSSPPPPY YSPSPKVHYK SPPPPYVYSS PPPPYYSPSP KVHYKSPPPP YVYNSPPPPY
541 YSPSPKVYYK SPPPPYVYSS PPPPYYSPSP KVYYKSPPPP YVYSSPPPPY YSPSPKVYYK
601 SPPPPYYSPS PKVYYKSPPH PHVCVCPPPP PCYSPSPKVV YKSPPPPYVY NSPPPPYYSP
661 SPKVYYKSPP PPSYYSPSPK VEYKSPPPPS YSPSPKTEY
//