LOCUS AEE79236.1 274 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SKP1/ASK-interacting protein 5 protein.
ACCESSION CP002686-7730
PROTEIN_ID AEE79236.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SKIP5"
/locus_tag="AT3G54480"
/gene_synonym="SKP1/ASK-interacting protein 5"
/gene_synonym="SKP5"
/inference="Similar to RNA sequence,
EST:INSD:AV540887.1,INSD:EH881877.1,INSD:ES164007.1,
INSD:BX835570.1,INSD:AU235413.1,INSD:BE528526.1,
INSD:T88668.1,INSD:DR380566.1,INSD:DR269054.1,
INSD:EL322797.1,INSD:DR269056.1,INSD:EH877450.1,
INSD:BP579941.1,INSD:ES150236.1,INSD:EL062857.1,
INSD:EL022080.1,INSD:EL007619.1,INSD:EG498793.1,
INSD:EG498794.1,INSD:ES067402.1,INSD:EL217512.1,
INSD:AI994665.1,INSD:BP661624.1,INSD:AA605467.1,
INSD:ES074087.1,INSD:AU226101.1,INSD:BP582671.1,
INSD:EL183316.1,INSD:EH964622.1,INSD:EL331933.1,
INSD:EL132478.1,INSD:EH858956.1,INSD:EH896963.1,
INSD:ES166414.1,INSD:DR269058.1,INSD:DR269059.1,
INSD:ES084076.1,INSD:ES186384.1,INSD:EL262346.1,
INSD:EH828853.1,INSD:EH901464.1,INSD:BP671092.1,
INSD:DR269057.1,INSD:EL994684.1,INSD:EL093875.1,
INSD:BP803000.1,INSD:DR269053.1,INSD:R90602.1,
INSD:EL321746.1,INSD:BP855951.1,INSD:EL084363.1,
INSD:EL976753.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF347972.1,INSD:BT005863.1,INSD:AF263381.1,
INSD:AF276888.1,INSD:AK227454.1,INSD:AY085042.1"
/note="SKP1/ASK-interacting protein 5 (SKIP5); CONTAINS
InterPro DOMAIN/s: F-box domain, cyclin-like
(InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364); Has 46 Blast hits to 46 proteins in
18 species: Archae - 2; Bacteria - 2; Metazoa - 5; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G54480"
/db_xref="Araport:AT3G54480"
intron_pos 55:1 (1/4)
intron_pos 103:2 (2/4)
intron_pos 130:0 (3/4)
intron_pos 149:2 (4/4)
BEGIN
1 MELHEISKLD NKKHPERIVE SKMKKRMKPY SLTSLNNLDD GCLMHILSFL SPIPDRYNTA
61 LVCHRWRYLA CHPRLWLRVD RFVKDLSQPG VFLNIESAVS AARPGDTILI VAGGNYRVSN
121 IQIKKPLCLV GGGEIPDETT LVCARGSDSA LELLSTCKLA NLTVKAELGC CLLHRSGRLT
181 IDGCVLQCET NPLDHLSCPI VSTAGDEDIE NILSHVEVKE TVTGKIKANS VTVLQTRIEG
241 GAKAVSTRGD LVLQRVRVMY SKAYLYFWFD VDYE
//