LOCUS AEE79228.1 273 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homolog of carrot EP3-3 chitinase protein.
ACCESSION CP002686-7720
PROTEIN_ID AEE79228.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EP3"
/locus_tag="AT3G54420"
/gene_synonym="ATCHITIV"
/gene_synonym="ATEP3"
/gene_synonym="CHITINASE CLASS IV"
/gene_synonym="CHIV"
/gene_synonym="homolog of carrot EP3-3 chitinase"
/gene_synonym="T14E10.4"
/inference="Similar to RNA sequence,
EST:INSD:EL076349.1,INSD:EL049059.1,INSD:BP811399.2,
INSD:Z26409.1,INSD:R83947.1,INSD:EL061142.1,
INSD:EL245933.1,INSD:BP665472.1,INSD:EG468057.1,
INSD:EH955397.1,INSD:AI993906.1,INSD:EL213309.1,
INSD:EH901773.1,INSD:EL211877.1,INSD:BE526089.1,
INSD:EG478392.1,INSD:EH927835.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT010422.1,INSD:AK176488.1"
/note="homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS
IN: chitinase activity; INVOLVED IN: somatic
embryogenesis, plant-type hypersensitive response; LOCATED
IN: cell wall; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro
DOMAIN/s: Chitin-binding, type 1, conserved site
(InterPro:IPR018371), Glycoside hydrolase, family 19
(InterPro:IPR016283), Chitin-binding, type 1
(InterPro:IPR001002), Glycoside hydrolase, family 19,
catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana
protein match is: Chitinase family protein
(TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins
in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34;
Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes
- 103 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54420"
/db_xref="Araport:AT3G54420"
intron_pos 139:1 (1/1)
BEGIN
1 MLTPTISKSI SLVTILLVLQ AFSNTTKAQN CGCSSELCCS QFGFCGNTSD YCGVGCQQGP
61 CFAPPPANGV SVAEIVTQEF FNGIISQAAS SCAGNRFYSR GAFLEALDSY SRFGRVGSTD
121 DSRREIAAFF AHVTHETGHF CYIEEIDGAS KDYCDENATQ YPCNPNKGYY GRGPIQLSWN
181 FNYGPAGTAI GFDGLNAPET VATDPVISFK TALWYWTNRV QPVISQGFGA TIRAINGALE
241 CDGANTATVQ ARVRYYTDYC RQLGVDPGNN LTC
//