LOCUS AEE79202.1 1008 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana suppressor of abi3-5 protein.
ACCESSION CP002686-7682
PROTEIN_ID AEE79202.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SUA"
/locus_tag="AT3G54230"
/gene_synonym="suppressor of abi3-5"
/note="suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion
binding, nucleotide binding, nucleic acid binding;
INVOLVED IN: nuclear mRNA splicing, via spliceosome;
LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677), D111/G-patch (InterPro:IPR000467),
Zinc finger, RanBP2-type (InterPro:IPR001876); BEST
Arabidopsis thaliana protein match is: ortholog of human
splicing factor SC35 (TAIR:AT5G64200.2)."
/db_xref="TAIR:AT3G54230"
/db_xref="Araport:AT3G54230"
intron_pos 17:0 (1/14)
intron_pos 30:2 (2/14)
intron_pos 269:0 (3/14)
intron_pos 293:0 (4/14)
intron_pos 324:0 (5/14)
intron_pos 350:2 (6/14)
intron_pos 402:0 (7/14)
intron_pos 430:1 (8/14)
intron_pos 461:0 (9/14)
intron_pos 484:0 (10/14)
intron_pos 544:0 (11/14)
intron_pos 608:1 (12/14)
intron_pos 884:1 (13/14)
intron_pos 947:0 (14/14)
BEGIN
1 MDPSRYGRQQ EWDNNSAPEG YGTQHDPNHR FGVSYDDGYP DERLMRDDVY NYPPGHNTLG
61 DLPQSRKRNY EENYPSELRR QEKPYIDSNY AADYYHDSEA GSRNGHYRDH EHERSSRYDG
121 CDDYSCNDNN YRSKNYHHSR DDGREKDYDY TRRSYDSEYE RASVRDGSRK SRDPQDRERN
181 SRDREWDSRD REWDKRCYSR ERDESPHKRY EKSRSRSTGR GEFSRSRSPR GRSHGRSYRE
241 DSYEGDHWNE SERRREYEDR HNQDHFSATP SATVVVKGLS MKSTEEDLYQ ILAEWGPLHH
301 VRVIREQNSG ISRGFAFIDF PTVDAARTMM DRIEHDGIVL DGRKLMFHYS SQPTGRAGVS
361 RRQEHASRRS YGGSRNMIVP TDWICTICGC INFARRTSCF QCNEPKTKDS PSADVGLSNS
421 AAGKRISETG PTHVLVVRGL DEDADEEMLR YEFSKHAPIK DLRLVRDKFT HVSRGFAFVH
481 FYSVEDATKA LEATNRTALE RNGKILRVAY AKSVHGSGTG ISAPSHSNNL AAAAIEAATF
541 SQQYDGVGWA PKEYNTGEKQ NTGGQAQGVG EIESQKGTSA PQSGYVWDEA SGYYYDAASG
601 YYYDGNSGLY YDSNSGLWYS YDQQTQQYVP CPDQNNESKV TENQPDSAKK EKSSQQKVII
661 SAATTPNVEK VLSLPDAVQA AAAAAIASEK REKERVKEIK LASKTSLLAS KKKMSNVLTM
721 WKQRSHETQI QRPSPSLGDN PPTVSAEARS SFSTGQSMGK LKSDVIIAKE RSTSNHGVSA
781 LTTAESSSSS TTGGTLMGVM RGSFGGTLGG ASSSASVQMP PILPSASPAS VSVSGSGRRR
841 FSETPTAGPT HREQPQTSYR DRAAERRNLY GSSTSSGNDV IDSSEDLMGL RKGSSDPTPF
901 PPGVGGRGIT TSTEVSSFDV ITEERAIDES NVGNRMLRNM GWHEGSGLGK DGSGMKEPVQ
961 AQGVDRRAGL GSQQKKVDAE FEVQPGDTYR TLLHKKALAR FRDMSDNN
//