LOCUS AEE79190.1 203 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Reticulon family protein protein.
ACCESSION CP002686-7669
PROTEIN_ID AEE79190.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G54120"
/inference="Similar to RNA sequence,
EST:INSD:BX834268.1,INSD:BP579091.1,INSD:AV794290.1,
INSD:BP590007.1,INSD:CK121846.1,INSD:AV558310.1,
INSD:EG499953.1,INSD:AV811276.1,INSD:EH888525.1,
INSD:BP625417.1,INSD:AV565851.1,INSD:EL035402.1,
INSD:BP597760.1,INSD:BP637126.1,INSD:EH904295.1,
INSD:BP590923.1,INSD:EH927344.1,INSD:AV540184.1,
INSD:AY164892.1,INSD:BP589427.1,INSD:BP664392.1,
INSD:AV559303.1,INSD:AA394821.1,INSD:BP660734.1,
INSD:DR377545.1,INSD:AU237860.1,INSD:BP598459.1,
INSD:BP586377.1,INSD:AV521472.1,INSD:AV440857.1,
INSD:AU228959.1,INSD:AV786777.1,INSD:CB254406.1,
INSD:DR382762.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT010698.1,INSD:BT010978.1,INSD:AK229371.1"
/note="Reticulon family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s:
Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana
protein match is: Reticulon family protein
(TAIR:AT3G19460.1); Has 661 Blast hits to 661 proteins in
56 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi
- 0; Plants - 460; Viruses - 0; Other Eukaryotes - 12
(source: NCBI BLink)."
/db_xref="TAIR:AT3G54120"
/db_xref="Araport:AT3G54120"
intron_pos 24:1 (1/3)
intron_pos 84:2 (2/3)
intron_pos 155:1 (3/3)
BEGIN
1 MSSSSDKLFN RDRTIHEILG GGIVADVMLW RKKNVSVGIV TVTIASWMVF EAFAYTIFTL
61 ISSVLLLLLS ILFLWSKSAS ILNRPSPPLP EFQISEAMAE EASIWLRIHV NKLLQVSHDI
121 AMARDSELYT KVAVSLFLLS LIGSLMDFQT LCHTSVLVVM TVPAFYERYE DYIVGSIEFI
181 CNKTRELYLR LEIWANPENK KLS
//