LOCUS AEE79176.1 305 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Inositol phosphorylceramide synthase
1 protein.
ACCESSION CP002686-7652
PROTEIN_ID AEE79176.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="AtIPCS1"
/locus_tag="AT3G54020"
/gene_synonym="Arabidopsis Inositol phosphorylceramide
synthase 1"
/inference="Similar to RNA sequence,
EST:INSD:AV793856.1,INSD:BP614873.1,INSD:DR339629.1,
INSD:BP655692.1,INSD:DR339628.1,INSD:EL106553.1,
INSD:BP856003.1,INSD:BP605845.1,INSD:BP820271.1,
INSD:DR339626.1,INSD:EL066644.1,INSD:EL064280.1,
INSD:DR339622.1,INSD:DR339625.1,INSD:BP862846.1,
INSD:DR370362.1,INSD:DR339620.1,INSD:BP619949.1,
INSD:ES042696.1,INSD:DR339630.1,INSD:BP620070.1,
INSD:ES139763.1,INSD:BP561542.1,INSD:EL997366.1,
INSD:DR339631.1,INSD:DR339621.1,INSD:BP616621.1,
INSD:DR339627.1,INSD:DR339623.1,INSD:BP597945.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY139802.1,INSD:BX823771.1"
/note="Arabidopsis Inositol phosphorylceramide synthase 1
(AtIPCS1); FUNCTIONS IN: inositol phosphoceramide synthase
activity; INVOLVED IN: sphingolipid biosynthetic process;
LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant
structures; BEST Arabidopsis thaliana protein match is:
Arabidopsis Inositol phosphorylceramide synthase 2
(TAIR:AT2G37940.1); Has 447 Blast hits to 444 proteins in
100 species: Archae - 0; Bacteria - 0; Metazoa - 254;
Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes -
90 (source: NCBI BLink)."
/db_xref="TAIR:AT3G54020"
/db_xref="Araport:AT3G54020"
intron_pos 12:0 (1/10)
intron_pos 42:0 (2/10)
intron_pos 71:0 (3/10)
intron_pos 94:0 (4/10)
intron_pos 121:0 (5/10)
intron_pos 145:0 (6/10)
intron_pos 165:1 (7/10)
intron_pos 199:2 (8/10)
intron_pos 247:1 (9/10)
intron_pos 283:0 (10/10)
BEGIN
1 MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT
61 LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI VKSKKIYTVL IWCRVLAFLV
121 ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS
181 HMIFTLVFVR TYQKYGSKRF IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF
241 LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301 ATNGT
//