LOCUS AEE79154.1 82 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein S21e protein.
ACCESSION CP002686-7625
PROTEIN_ID AEE79154.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G53890"
/inference="Similar to RNA sequence,
EST:INSD:DR194885.1,INSD:DR194927.1,INSD:DR194943.1,
INSD:BP594739.1,INSD:EL069199.1,INSD:ES109742.1,
INSD:DR194958.1,INSD:DR194890.1,INSD:EL968042.1,
INSD:BP812232.1,INSD:BP845804.2,INSD:DR224676.1,
INSD:ES095053.1,INSD:DR194932.1,INSD:BP830086.1,
INSD:EH873939.1,INSD:BP635078.1,INSD:DR194929.1,
INSD:AV783851.1,INSD:DR194921.1,INSD:ES047026.1,
INSD:EH902112.1,INSD:DR194884.1,INSD:ES211219.1,
INSD:DR194899.1,INSD:DR194888.1,INSD:ES007675.1,
INSD:DR194881.1,INSD:DR194903.1,INSD:ES142535.1,
INSD:DR194950.1,INSD:EH822563.1,INSD:BP642333.1,
INSD:AV815381.1,INSD:DR194962.1,INSD:ES135277.1,
INSD:DR194937.1,INSD:BP634579.1,INSD:AV789462.1,
INSD:CB254144.1,INSD:EH925344.1,INSD:DR194901.1,
INSD:DR194961.1,INSD:ES043164.1,INSD:ES084406.1,
INSD:DR194917.1,INSD:BP595319.1,INSD:BP645497.1,
INSD:ES095404.1,INSD:EL971645.1,INSD:EH946021.1,
INSD:ES026391.1,INSD:DR194893.1,INSD:BP670909.1,
INSD:BP832126.1,INSD:ES088199.1,INSD:BP627392.1,
INSD:ES024483.1,INSD:DR194883.1,INSD:BP568951.1,
INSD:EH902498.1,INSD:AI997498.1,INSD:DR194894.1,
INSD:DR194915.1,INSD:BP592813.1,INSD:DR194923.1,
INSD:DR194904.1,INSD:ES031064.1,INSD:ES178096.1,
INSD:ES073090.1,INSD:DR194889.1,INSD:DR194940.1,
INSD:BP796854.1,INSD:DR194933.1,INSD:BP584043.1,
INSD:DR194918.1,INSD:ES159200.1,INSD:BP847988.1,
INSD:BP832819.1,INSD:EL993697.1,INSD:DR194947.1,
INSD:DR194905.1,INSD:DR194931.1,INSD:BP799873.1,
INSD:DR194906.1,INSD:EG520937.1,INSD:EG474035.1,
INSD:BP635694.1,INSD:CB074277.1,INSD:BP567243.1,
INSD:DR194920.1,INSD:DR194891.1,INSD:AV535751.1,
INSD:DR194922.1,INSD:EH888547.1,INSD:DR203828.1,
INSD:DR194924.1,INSD:AV787983.1,INSD:DR194914.1,
INSD:EL304900.1,INSD:BP806888.1,INSD:BP628048.1,
INSD:DR251774.1,INSD:DR194882.1,INSD:DR194935.1,
INSD:DR194938.1,INSD:DR194952.1,INSD:BP582869.1,
INSD:EL105553.1,INSD:DR194930.1,INSD:BP825004.1,
INSD:BP813160.1,INSD:EH943744.1,INSD:ES078942.1,
INSD:DR194960.1,INSD:DR194946.1,INSD:ES094178.1,
INSD:ES029137.1,INSD:AV536905.1,INSD:DR295400.1,
INSD:DR194939.1,INSD:BP840703.1,INSD:BP832463.1,
INSD:BX836709.1,INSD:ES180656.1,INSD:DR194953.1,
INSD:ES093691.1,INSD:DR194911.1,INSD:AV787795.1,
INSD:ES035800.1,INSD:DR194955.1,INSD:DR382562.1,
INSD:DR194892.1,INSD:DR194941.1,INSD:ES009571.1,
INSD:ES186097.1,INSD:BP812144.1,INSD:AV532250.1,
INSD:DR194902.1,INSD:DR194880.1,INSD:EL254531.1,
INSD:DR194956.1,INSD:BP867421.1,INSD:EH880453.1,
INSD:DR194898.1,INSD:EH852669.1,INSD:DR194944.1,
INSD:DR194897.1,INSD:DR194910.1,INSD:EL174636.1,
INSD:CB254434.1,INSD:EL269007.1,INSD:DR194942.1,
INSD:BP806090.1,INSD:DR194887.1,INSD:BP595291.1,
INSD:DR194926.1,INSD:ES192637.1,INSD:DR374150.1,
INSD:AV809456.1,INSD:DR194963.1,INSD:DR194913.1,
INSD:BE662823.1,INSD:DR262375.1,INSD:DR194936.1,
INSD:DR194912.1,INSD:DR194957.1,INSD:DR194919.1,
INSD:DR194909.1,INSD:DR194916.1,INSD:ES059063.1,
INSD:BP814433.1,INSD:DR194951.1,INSD:EH987614.1,
INSD:DR194948.1,INSD:ES166933.1,INSD:DR194949.1,
INSD:BP656192.1,INSD:BP634436.1,INSD:DR194934.1,
INSD:DR194954.1,INSD:ES043883.1,INSD:ES190202.1,
INSD:EH854454.1,INSD:DR194945.1,INSD:DR194928.1,
INSD:ES170555.1,INSD:EL220295.1,INSD:BP560919.2,
INSD:DR194908.1,INSD:EL182022.1,INSD:AV564516.1,
INSD:BP817842.1,INSD:EL983050.1,INSD:DR194895.1,
INSD:ES175556.1,INSD:EL013742.1,INSD:DR194900.1,
INSD:DR194879.1,INSD:DR194886.1,INSD:DR194959.1,
INSD:DR194907.1,INSD:DR194896.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842173.1,INSD:AY065200.1,INSD:BX826232.1,
INSD:BX822239.1,INSD:AY086689.1,INSD:BX825864.1,
INSD:BX842195.1,INSD:BX842222.1,INSD:BX822942.1,
INSD:AY081547.1"
/note="Ribosomal protein S21e; FUNCTIONS IN: structural
constituent of ribosome; INVOLVED IN: translation,
ribosome biogenesis; LOCATED IN: cytosolic small ribosomal
subunit, cytosolic ribosome, ribosome; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e
(InterPro:IPR001931), Ribosomal protein S21e, conserved
site (InterPro:IPR018279); BEST Arabidopsis thaliana
protein match is: Ribosomal protein S21e
(TAIR:AT5G27700.1); Has 661 Blast hits to 661 proteins in
257 species: Archae - 0; Bacteria - 0; Metazoa - 294;
Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes -
110 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53890"
/db_xref="Araport:AT3G53890"
intron_pos 17:2 (1/2)
intron_pos 62:0 (2/2)
BEGIN
1 MENDAGQVTE LYIPRKCSAT NRMITSKDHA SVQLNIGHLD ANGLYTGQFT TFALCGFVRA
61 QGDADSGVDR LWQKKKVEAK QQ
//