LOCUS AEE79142.1 270 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RHOMBOID-like protein 4 protein.
ACCESSION CP002686-7606
PROTEIN_ID AEE79142.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RBL4"
/locus_tag="AT3G53780"
/gene_synonym="ATRBL4"
/gene_synonym="RHOMBOID-like protein 4"
/inference="Similar to RNA sequence,
EST:INSD:EL283537.1,INSD:AV822662.1,INSD:AV549534.1,
INSD:EL018309.1,INSD:EL057750.1,INSD:AV788624.1,
INSD:BP790152.1,INSD:AV808211.1,INSD:BP606073.1,
INSD:AV783478.1,INSD:BP815619.1,INSD:EH813384.1,
INSD:BP616918.1,INSD:EL151989.1,INSD:BP789928.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT029533.1,INSD:AF370347.1"
/note="RHOMBOID-like protein 4 (RBL4); FUNCTIONS IN:
serine-type endopeptidase activity; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Peptidase S54, rhomboid (InterPro:IPR002610); BEST
Arabidopsis thaliana protein match is: RHOMBOID-like 1
(TAIR:AT2G29050.1); Has 6501 Blast hits to 6500 proteins
in 1879 species: Archae - 139; Bacteria - 4229; Metazoa -
522; Fungi - 151; Plants - 328; Viruses - 0; Other
Eukaryotes - 1132 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53780"
/db_xref="Araport:AT3G53780"
intron_pos 52:1 (1/4)
intron_pos 107:0 (2/4)
intron_pos 188:2 (3/4)
intron_pos 231:0 (4/4)
BEGIN
1 MGGLDVKKVV KGDEGWRLLS CNWLHGGVVH LLMNMLTLLF IGIRMEREFG FIRIGLLYLI
61 SGFGGSILSA LFLRSNISVG ASGAVFGLLG GMLSEIFINW TIYSNKVVTI VTLVLIVAVN
121 LGLGVLPGVD NFAHIGGFAT GFLLGFVLLI RPHYGWINQR NGPGAKPHRF KIYQGILWTI
181 SLLILVAGFI VGLISLFNNV DGNEHCSWCH YLSCVPTSKW SCNREPASCT TTQLGNQLSM
241 TCLRNGKSAS YILANPSDSR INSLCVQLCR
//