LOCUS AEE79139.1 745 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GAMMA-TUBULIN COMPLEX PROTEIN 4 protein.
ACCESSION CP002686-7601
PROTEIN_ID AEE79139.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GCP4"
/locus_tag="AT3G53760"
/gene_synonym="ATGCP4"
/gene_synonym="GAMMA-TUBULIN COMPLEX PROTEIN 4"
/inference="Similar to RNA sequence,
EST:INSD:EL079695.1,INSD:ES166900.1,INSD:EL341292.1,
INSD:AV543024.1,INSD:ES103062.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT012412.1,INSD:BX823602.1,INSD:BT012227.1"
/note="GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); CONTAINS
InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST
Arabidopsis thaliana protein match is: spindle pole body
component 98 (TAIR:AT5G06680.1); Has 1249 Blast hits to
1181 proteins in 191 species: Archae - 0; Bacteria - 0;
Metazoa - 551; Fungi - 320; Plants - 155; Viruses - 0;
Other Eukaryotes - 223 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53760"
/db_xref="Araport:AT3G53760"
intron_pos 57:2 (1/15)
intron_pos 157:0 (2/15)
intron_pos 202:2 (3/15)
intron_pos 235:2 (4/15)
intron_pos 276:0 (5/15)
intron_pos 367:0 (6/15)
intron_pos 394:0 (7/15)
intron_pos 422:0 (8/15)
intron_pos 451:0 (9/15)
intron_pos 469:2 (10/15)
intron_pos 530:2 (11/15)
intron_pos 606:0 (12/15)
intron_pos 635:2 (13/15)
intron_pos 687:0 (14/15)
intron_pos 728:0 (15/15)
BEGIN
1 MLHELLLALL GFTGDLIVDE REQRKTLGLA FNSDSPLSDE CTFKLAPDIS FIEPSERDLI
61 ERLIKLGFYY RELDRFAKKS RNLSWIRSVT SVHPLERADE LSKQSREKKP SVYRRAIANG
121 IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ
181 LLNVLNKRCH CGVPELRTCL QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD
241 LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301 RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA
361 MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD LNGHLKALKD YFLLEKGDFF
421 QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS
481 QADMVRSKVS LTGKANLTSD TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR
541 LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601 QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK
661 LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR SSKLAGSQRA PFLRRFLLRL
721 NFNSFYEATA RGVLNVVRQR PALPL
//