LOCUS AEE79108.1 340 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-7564
PROTEIN_ID AEE79108.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G53560"
/inference="Similar to RNA sequence,
EST:INSD:DR238527.1,INSD:AV557989.1,INSD:DR238536.1,
INSD:EG519700.1,INSD:AA597604.1,INSD:EL153308.1,
INSD:EH900987.1,INSD:AI998727.1,INSD:DR238530.1,
INSD:DR238539.1,INSD:ES114234.1,INSD:EH888203.1,
INSD:EG519699.1,INSD:AV531974.1,INSD:DR238521.1,
INSD:EH883058.1,INSD:EG472252.1,INSD:ES151443.1,
INSD:BP660740.1,INSD:ES062078.1,INSD:EH955287.1,
INSD:DR238538.1,INSD:DR238522.1,INSD:DR238535.1,
INSD:DR238525.1,INSD:DR238537.1,INSD:DR238533.1,
INSD:BP794396.1,INSD:DR238540.1,INSD:DR238531.1,
INSD:DR238523.1,INSD:EH888489.1,INSD:EH912847.1,
INSD:DR238528.1,INSD:AV563403.1,INSD:DR238534.1,
INSD:EL310065.1,INSD:EH870282.1,INSD:DR238529.1,
INSD:BP598329.1,INSD:AV440148.1,INSD:EH975885.1,
INSD:EL065205.1,INSD:DR238526.1,INSD:EL206637.1,
INSD:DR375676.1,INSD:DR238524.1,INSD:AV817731.1,
INSD:ES099128.1,INSD:EL980090.1,INSD:AV813474.1,
INSD:AV830844.1,INSD:DR238532.1,INSD:EL264566.1,
INSD:BP622718.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000274.1,INSD:AY099742.1,INSD:BX822155.1,
INSD:AY089123.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast thylakoid lumen,
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide-like helical (InterPro:IPR011990),
Tetratricopeptide repeat-containing (InterPro:IPR013026),
Tetratricopeptide repeat (InterPro:IPR019734); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein (TAIR:AT2G37400.1);
Has 1386 Blast hits to 1214 proteins in 325 species:
Archae - 90; Bacteria - 682; Metazoa - 125; Fungi - 22;
Plants - 131; Viruses - 0; Other Eukaryotes - 336 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G53560"
/db_xref="Araport:AT3G53560"
BEGIN
1 MESLGKLQLH HQPFHLSFTH TSSSTFPKNL FKSSIQPISS LKSASIKASS SKFQNSITPL
61 PKSTPFRLFK STCITLTTAA ALLLANLHLK SPAIAAPIAP PPSVESKENV TLEEEERALD
121 EHLITHPSDV DALRSLMEVK IKSRKLTEAV EVIDRLIKLE PEEKEWPVLK ANIFTYSGDL
181 DLAKTGFEEI LAKDPLRVEA YHGLLMAYSD AGLDLKEVES RIEEAMLKCK KENNQNDFRD
241 FKLLVAQIRV IEGKHSEALK LYQELVKEEP RDFRPYLCQG IIYTLLKKKD KAEEQFDNFR
301 KLVPKNHPYR EYFMDNMIAT KLFSEKAQRE MAEEMAGSTS
//