LOCUS AEE79090.1 342 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana chloroplast RNA-binding protein 29 protein.
ACCESSION CP002686-7543
PROTEIN_ID AEE79090.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CP29"
/locus_tag="AT3G53460"
/gene_synonym="chloroplast RNA-binding protein 29"
/inference="Similar to RNA sequence,
EST:INSD:BP809060.1,INSD:BP845898.1,INSD:DR270100.1,
INSD:ES194677.1,INSD:ES163180.1,INSD:BP809197.1,
INSD:BP851761.1,INSD:DR270157.1,INSD:EL197818.1,
INSD:EG526082.1,INSD:DR270107.1,INSD:DR270156.1,
INSD:ES091254.1,INSD:EH970108.1,INSD:R84010.1,
INSD:EH936747.1,INSD:DR270151.1,INSD:EH977766.1,
INSD:EH938455.1,INSD:EG431029.1,INSD:EH989723.1,
INSD:BP843216.1,INSD:BP852903.1,INSD:CK120603.1,
INSD:BP843838.1,INSD:EL122139.1,INSD:DR262099.1,
INSD:DR270161.1,INSD:DR270124.1,INSD:DR270131.1,
INSD:DR270123.1,INSD:EH990324.1,INSD:AV525116.1,
INSD:BP813177.2,INSD:T43528.1,INSD:EH933165.1,
INSD:H77099.1,INSD:BP860851.1,INSD:DR270130.1,
INSD:EL208281.1,INSD:EL136691.1,INSD:DR270117.1,
INSD:DR262101.1,INSD:EL206557.1,INSD:EL152599.1,
INSD:EH840356.1,INSD:AV439891.1,INSD:EL019432.1,
INSD:EH923080.1,INSD:EL333976.1,INSD:EL112802.1,
INSD:R30134.1,INSD:EL118114.1,INSD:EL243550.1,
INSD:EH890009.1,INSD:ES134922.1,INSD:AV519288.1,
INSD:EL301715.1,INSD:BP852136.1,INSD:DR270115.1,
INSD:EH957931.1,INSD:DR270109.1,INSD:EL005387.1,
INSD:EL312597.1,INSD:EL242911.1,INSD:CK119054.1,
INSD:EH853190.1,INSD:AV527212.1,INSD:DR270143.1,
INSD:DR270102.1,INSD:EL186988.1,INSD:ES121454.1,
INSD:DR270104.1,INSD:BP862494.1,INSD:DR270139.1,
INSD:EH835699.1,INSD:BP861650.1,INSD:R30051.1,
INSD:EL278060.1,INSD:DR270141.1,INSD:ES193355.1,
INSD:EL978198.1,INSD:ES073390.1,INSD:EL182922.1,
INSD:EG526081.1,INSD:EH918798.1,INSD:EH980991.1,
INSD:AV524921.1,INSD:BP845249.1,INSD:BP866040.1,
INSD:AV525393.1,INSD:EL254857.1,INSD:BP808308.1,
INSD:DR270122.1,INSD:DR270158.1,INSD:BP863503.1,
INSD:EH955292.1,INSD:EL113731.1,INSD:ES188277.1,
INSD:ES142386.1,INSD:EH938909.1,INSD:AV440293.1,
INSD:EH912293.1,INSD:EL145304.1,INSD:N96387.1,
INSD:AA728715.1,INSD:DR270114.1,INSD:DR270119.1,
INSD:CK118973.1,INSD:EL073351.1,INSD:DR270125.1,
INSD:BP834207.1,INSD:EL046194.1,INSD:EH897890.1,
INSD:EH852934.1,INSD:EH946650.1,INSD:EH941281.1,
INSD:EL171822.1,INSD:ES019109.1,INSD:EH905848.1,
INSD:EL224810.1,INSD:EL223559.1,INSD:ES017633.1,
INSD:EL023522.1,INSD:BP823765.1,INSD:CB264908.1,
INSD:DR270159.1,INSD:CK119871.1,INSD:EH903472.1,
INSD:DR270099.1,INSD:BP858759.1,INSD:BP834358.2,
INSD:DR270132.1,INSD:EL113314.1,INSD:AV442367.1,
INSD:DR270134.1,INSD:ES119362.1,INSD:EH935713.1,
INSD:BP843530.1,INSD:DR270148.1,INSD:ES015698.1,
INSD:BP828724.1,INSD:BP835964.1,INSD:DR270150.1,
INSD:EL269363.1,INSD:DR270112.1,INSD:DR270110.1,
INSD:ES084816.1,INSD:EL149928.1,INSD:ES131100.1,
INSD:ES036853.1,INSD:BP816605.1,INSD:EL201723.1,
INSD:BP821657.1,INSD:AV517988.1,INSD:DR270133.1,
INSD:T20774.1,INSD:EH864014.1,INSD:ES027459.1,
INSD:R90139.1,INSD:EL309621.1,INSD:EL193944.1,
INSD:EH954381.1,INSD:DR270105.1,INSD:DR270153.1,
INSD:BP857383.1,INSD:EG526992.1,INSD:DR270127.1,
INSD:BP807340.1,INSD:EH992350.1,INSD:CK118744.1,
INSD:DR270129.1,INSD:BP562159.2,INSD:BP849316.1,
INSD:BE525796.1,INSD:BP819219.1,INSD:BP856250.1,
INSD:R90659.1,INSD:DR270154.1,INSD:DR270128.1,
INSD:BP863533.1,INSD:DR270101.1,INSD:ES006445.1,
INSD:DR270135.1,INSD:BP857116.1,INSD:DR262098.1,
INSD:DR270098.1,INSD:DR270108.1,INSD:EL219743.1,
INSD:ES103081.1,INSD:EG420745.1,INSD:BP853153.1,
INSD:DR270145.1,INSD:DR270118.1,INSD:ES060995.1,
INSD:EL323327.1,INSD:ES146859.1,INSD:ES164828.1,
INSD:BP851781.1,INSD:BP815791.1,INSD:AV822343.1,
INSD:DR270121.1,INSD:DR270138.1,INSD:EL122954.1,
INSD:DR262100.1,INSD:EH842734.1,INSD:BP834494.1,
INSD:EG526993.1,INSD:DR270126.1,INSD:DR270144.1,
INSD:T20726.1,INSD:EG526991.1,INSD:DR270103.1,
INSD:EL994528.1,INSD:BP866419.1,INSD:BP809870.1,
INSD:EH932665.1,INSD:BP839353.1,INSD:EL131206.1,
INSD:BP810686.1,INSD:DR270152.1,INSD:EL212851.1,
INSD:EL078137.1,INSD:T20494.1,INSD:DR270163.1,
INSD:R64831.1,INSD:ES106409.1,INSD:DR270160.1,
INSD:BP849657.1,INSD:AA067486.1,INSD:BP560504.1,
INSD:BP859254.1,INSD:ES035155.1,INSD:BP852165.1,
INSD:DR270142.1,INSD:EL004971.1,INSD:DR270111.1,
INSD:EL260249.1,INSD:EL027409.1,INSD:DR270140.1,
INSD:ES098098.1,INSD:EL263334.1,INSD:ES074120.1,
INSD:EH826473.1,INSD:DR270146.1,INSD:EL087467.1,
INSD:EH968082.1,INSD:DR270137.1,INSD:DR270155.1,
INSD:ES023148.1,INSD:DR270149.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY077674.1"
/note="chloroplast RNA-binding protein 29 (CP29);
FUNCTIONS IN: RNA binding, poly(U) RNA binding; LOCATED
IN: thylakoid, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 16 growth stages; CONTAINS
InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: RNA-binding (RRM/RBD/RNP motifs) family protein
(TAIR:AT2G37220.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53460"
/db_xref="Araport:AT3G53460"
intron_pos 130:0 (1/3)
intron_pos 164:0 (2/3)
intron_pos 322:0 (3/3)
BEGIN
1 MSASASSLSA FNPKSLPLCV SRPASVSVLP PSLSFKLHSD HLVSIFASSA LKCSSPAEYP
61 SRFVRNVAVS SDFEVEEDDM FADGDDSAPV ERNSFSPDLK LFVGNLSFNV DSAQLAQLFE
121 SAGNVEMVEV IYDKVTGRSR GFGFVTMSTA AEVEAAAQQF NGYEFEGRPL RVNAGPPPPK
181 REESFSRGPR SGGYGSERGG GYGSERGGGY GSERGGGYGS ERGGGYGSQR SGGGYGGSQR
241 SSYGSGSGSG SGSGSGNRLY VGNLSWGVDD MALENLFNEQ GKVVEARVIY DRDSGRSKGF
301 GFVTLSSSQE VQKAINSLNG ADLDGRQIRV SEAEARPPRG QF
//