LOCUS AEE79079.1 558 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002686-7533
PROTEIN_ID AEE79079.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G53390"
/inference="Similar to RNA sequence,
EST:INSD:ES038257.1,INSD:EG514926.1,INSD:F20090.1,
INSD:BP827907.1,INSD:EL976836.1,INSD:ES116655.1,
INSD:EH844030.1,INSD:BP779986.1,INSD:BP603007.1,
INSD:BP596513.1,INSD:AV806993.1,INSD:ES095882.1,
INSD:ES006698.1,INSD:AV555303.1,INSD:ES033864.1,
INSD:ES146017.1,INSD:ES044050.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX823385.1"
/note="Transducin/WD40 repeat-like superfamily protein;
CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT2G37160.1); Has 13890 Blast hits to 8004 proteins
in 489 species: Archae - 30; Bacteria - 3923; Metazoa -
4011; Fungi - 2926; Plants - 1297; Viruses - 0; Other
Eukaryotes - 1703 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53390"
/db_xref="Araport:AT3G53390"
intron_pos 62:0 (1/10)
intron_pos 168:0 (2/10)
intron_pos 204:1 (3/10)
intron_pos 235:2 (4/10)
intron_pos 265:0 (5/10)
intron_pos 293:0 (6/10)
intron_pos 325:1 (7/10)
intron_pos 354:2 (8/10)
intron_pos 390:0 (9/10)
intron_pos 421:0 (10/10)
BEGIN
1 MMNTSNGMIS APSSSSSPAA NPQSPGIKTY FKTPEGKYKL HYEKTHSSGL LHYAHGKTVT
61 QVTIAQLKER AAPSTPTGTS SGYSASSGFR SATARLLGTG NGSRALSFVG GNGGGKSVST
121 SSRISGSFAA SNSNTSMTNT NFDGKGTYLV FNVSDAIFIC DLNSQEKDPV KSIHFSNSNP
181 MCHAFDPDAK DGHDLLIGLN SGDVYTVSLR QQLQDVSKKL VGALHYNKDG SVNNSRCTSI
241 SWVPGGDGAF VVAHADGNLY VYEKNKDGAT ESTFPAIRDP TQFSVDKAKY SKSNPVARWH
301 ICQGSINSIA FSNDGAHLAT VGRDGYLRIF DFLTQKLVCG GKSYYGALLC CSWSMDGKYI
361 LTGGEDDLVQ VWSMEDRKVV AWGEGHNSWV SGVAFDSNWS SPNSDGSGEH VMYRFGSVGQ
421 DTQLLLWDLE MDEIVVPLRR APGGSPTYST GSSAHWDNVI PMGTLQPAPC KRDVPKLSPI
481 IAHRVHTEPL SGLMFTQESV VTACREGHIK IWTRPSESET QTNSSEANPT TALLSTSFTK
541 DNKASLSSKI ISGSTFKQ
//