LOCUS AEE79076.1 76 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana S1FA-like DNA-binding protein protein.
ACCESSION CP002686-7531
PROTEIN_ID AEE79076.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G53370"
/inference="Similar to RNA sequence,
EST:INSD:EL979259.1,INSD:EH810354.1,INSD:ES215519.1,
INSD:DR378521.1,INSD:ES040231.1,INSD:DR239915.1,
INSD:EL218276.1,INSD:EL100920.1,INSD:EL967990.1,
INSD:BP818181.1,INSD:T20524.1,INSD:DR239918.1,
INSD:DR239913.1,INSD:BP798420.1,INSD:ES118099.1,
INSD:ES172429.1,INSD:EH816838.1,INSD:DR239916.1,
INSD:DR239910.1,INSD:EL066983.1,INSD:AV531213.1,
INSD:EL090697.1,INSD:DR239917.1,INSD:DR239914.1,
INSD:EL071256.1,INSD:AA586172.1,INSD:AI993917.1,
INSD:DR373819.1,INSD:EL067044.1,INSD:EL187040.1,
INSD:DR239912.1,INSD:EH887047.1,INSD:ES009240.1,
INSD:BP579819.1,INSD:DR239909.1,INSD:AV532624.1,
INSD:DR239911.1,INSD:AV783338.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY088845.1,INSD:AY059136.1,INSD:BX826119.1,
INSD:AF370176.1"
/note="S1FA-like DNA-binding protein; FUNCTIONS IN: DNA
binding; INVOLVED IN: regulation of transcription; LOCATED
IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA
binding protein S1FA (InterPro:IPR006779); BEST
Arabidopsis thaliana protein match is: S1FA-like
DNA-binding protein (TAIR:AT2G37120.1); Has 76 Blast hits
to 76 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53370"
/db_xref="Araport:AT3G53370"
intron_pos 10:0 (1/1)
BEGIN
1 MDGEDFAGKA AAEAKGLNPG LIVLLVVGGP LLVFLIANYV LYVYAQKNLP PRKKKPVSKK
61 KLKREKLKQG VPVPGE
//