LOCUS AEE79059.1 280 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Small nuclear RNA activating complex
(SNAPc), subunit SNAP43 protein protein.
ACCESSION CP002686-7503
PROTEIN_ID AEE79059.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G53270"
/inference="Similar to RNA sequence,
EST:INSD:H76492.1,INSD:DR381466.1,INSD:ES078551.1,
INSD:ES209266.1,INSD:EG525644.1,INSD:BU635299.1,
INSD:BP563717.1,INSD:N96402.1,INSD:AV825481.1,
INSD:BP563205.1,INSD:BE524570.1,INSD:EH833811.1,
INSD:CD530885.1,INSD:AV791373.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY113949.1,INSD:AY080842.1"
/note="Small nuclear RNA activating complex (SNAPc),
subunit SNAP43 protein; CONTAINS InterPro DOMAIN/s: Small
nuclear RNA activating complex (SNAPc), subunit SNAP43
(InterPro:IPR019188); Has 91 Blast hits to 91 proteins in
32 species: Archae - 0; Bacteria - 0; Metazoa - 48; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink)."
/db_xref="TAIR:AT3G53270"
/db_xref="Araport:AT3G53270"
intron_pos 20:0 (1/6)
intron_pos 62:1 (2/6)
intron_pos 100:1 (3/6)
intron_pos 164:2 (4/6)
intron_pos 180:0 (5/6)
intron_pos 205:1 (6/6)
BEGIN
1 MNLSPFKRDI DELIDEFVED DLTTFADMKS VWLSRKFSHI YEASPNSNLA FFMQSLYVHT
61 IGHMVSIDSF SRRLGGLYCL YCLHEIQPFK PKFRIYISLQ ELGKFRDLVV EAKDKGVEIA
121 AAVAKKMLDE NMLIFGAVDE TSATKTIHQL TELQNARVRF AYEKLICDTS INQFIHLDMG
181 KEVDLNSLDK MSIEYAEAKK RAVEGAGEIM EIDDIKHISE EKELMGERME KLKEEWDSQR
241 LYFYEQTKLD GFTTTPKQLT NVEHDEDDGF DELDRLLSQS
//