LOCUS AEE79055.1 717 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phenylalanine ammonia-lyase 2 protein.
ACCESSION CP002686-7495
PROTEIN_ID AEE79055.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PAL2"
/locus_tag="AT3G53260"
/gene_synonym="ATPAL2"
/gene_synonym="phenylalanine ammonia-lyase 2"
/inference="Similar to RNA sequence,
EST:INSD:BE523478.1,INSD:AV554116.1,INSD:BP795043.1,
INSD:EH931353.1,INSD:AV544717.1,INSD:EH865646.1,
INSD:BP786338.1,INSD:BP660761.1,INSD:DR349943.1,
INSD:EH911586.1,INSD:BP600906.1,INSD:EH860513.1,
INSD:AV813837.1,INSD:BP792140.1,INSD:EL035830.1,
INSD:AV826964.1,INSD:EL184977.1,INSD:EH870461.1,
INSD:AV553551.1,INSD:BP786658.1,INSD:AV553169.1,
INSD:AV814928.1,INSD:EH840583.1,INSD:AV819960.1,
INSD:DR379468.1,INSD:EL129868.1,INSD:BP589483.1,
INSD:BP850698.2,INSD:BE662969.1,INSD:AV797794.1,
INSD:AV558603.1,INSD:ES131969.1,INSD:EH924845.1,
INSD:EH954175.1,INSD:AV827140.1,INSD:AV564149.1,
INSD:BP604648.1,INSD:EG520779.1,INSD:AV548841.1,
INSD:EH823403.1,INSD:DR349936.1,INSD:AV530068.1,
INSD:EL233542.1,INSD:BP636326.1,INSD:ES066464.1,
INSD:EL197825.1,INSD:EH922038.1,INSD:DR349939.1,
INSD:AV548412.1,INSD:CF651268.1,INSD:AV547686.1,
INSD:AV552832.1,INSD:EL217765.1,INSD:CB255817.1,
INSD:AV797838.1,INSD:AV559798.1,INSD:AV790081.1,
INSD:DR349935.1,INSD:ES140704.1,INSD:EH984065.1,
INSD:DR349942.1,INSD:AV801904.1,INSD:BP854353.1,
INSD:AV809260.1,INSD:ES022009.1,INSD:AV565930.1,
INSD:AV558919.1,INSD:BP628093.1,INSD:AV555366.1,
INSD:AV553183.1,INSD:AV524210.1,INSD:EH803581.1,
INSD:EH933095.1,INSD:BP597546.1,INSD:DR349932.1,
INSD:AI997452.1,INSD:BP860544.1,INSD:BP624388.1,
INSD:EH869201.1,INSD:AV821771.1,INSD:AV547599.1,
INSD:AV811681.1,INSD:BX839159.1,INSD:BE527821.1,
INSD:EH969610.1,INSD:BP824841.1,INSD:DR349940.1,
INSD:EL281835.1,INSD:R90445.1,INSD:T45429.1,
INSD:EG485383.1,INSD:DR349941.1,INSD:AV797345.1,
INSD:BE525043.1,INSD:BE528729.1,INSD:EL232039.1,
INSD:AV544960.1,INSD:AV820261.1,INSD:EL045199.1,
INSD:ES129478.1,INSD:EG485382.1,INSD:AV796886.1,
INSD:BP864573.1,INSD:BP864027.1,INSD:EL170867.1,
INSD:BP788013.1,INSD:AV782312.1,INSD:AV545374.1,
INSD:EL022009.1,INSD:EL312834.1,INSD:AV555308.1,
INSD:DR349931.1,INSD:EL158614.1,INSD:BP604499.1,
INSD:DR349933.1,INSD:BX839621.1,INSD:DR349934.1,
INSD:AV553022.1,INSD:EG440198.1,INSD:EL157364.1,
INSD:AV544709.1,INSD:BX840680.1,INSD:EL176259.1,
INSD:EG440201.1,INSD:EL199215.1,INSD:AV546412.1,
INSD:DR349937.1,INSD:AV544318.1,INSD:AV559270.1,
INSD:AV547835.1,INSD:EL201328.1,INSD:AV821038.1,
INSD:EH988684.1,INSD:CF651266.1,INSD:ES120690.1,
INSD:DR349938.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY133595.1,INSD:AY092957.1,INSD:AY303129.1,
INSD:AF367308.1,INSD:BT000035.1,INSD:AY088956.1"
/note="phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN:
phenylalanine ammonia-lyase activity; INVOLVED IN:
response to oxidative stress, response to karrikin,
phenylpropanoid biosynthetic process, response to
wounding, defense response; LOCATED IN: cytoplasm;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Phenylalanine/histidine ammonia-lyase
(InterPro:IPR001106), Phenylalanine/histidine
ammonia-lyases, active site (InterPro:IPR022313),
L-Aspartase-like (InterPro:IPR008948), Phenylalanine
ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis
thaliana protein match is: PHE ammonia lyase 1
(TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins
in 1397 species: Archae - 40; Bacteria - 2928; Metazoa -
79; Fungi - 127; Plants - 1172; Viruses - 0; Other
Eukaryotes - 489 (source: NCBI BLink)."
/db_xref="TAIR:AT3G53260"
/db_xref="Araport:AT3G53260"
intron_pos 135:2 (1/1)
BEGIN
1 MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG
61 GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME SMNKGTDSYG VTTGFGATSH
121 RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL
181 EAITSLLNHN ISPSLPLRGT ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE
241 KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301 FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW
361 LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN FQGTPIGVSM DNTRLAIAAI
421 GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH
481 VQSAEQHNQD VNSLGLISSR KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT
541 VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601 HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP
661 LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID PLMDCLKEWN GAPIPIC
//