LOCUS AEE79050.1 815 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ATPase, AAA-type, CDC48 protein protein.
ACCESSION CP002686-7487
PROTEIN_ID AEE79050.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="AtCDC48B"
/locus_tag="AT3G53230"
/gene_synonym="cell division cycle 48B"
/inference="Similar to RNA sequence,
EST:INSD:AU228349.1,INSD:ES012166.1,INSD:EH989384.1,
INSD:Z34605.1,INSD:AV818681.1,INSD:BX841340.1,
INSD:EL304194.1,INSD:EG479419.1,INSD:EL310562.1,
INSD:BP567638.1,INSD:BP569213.1,INSD:BP865805.1,
INSD:BP803598.1,INSD:EG453624.1,INSD:BP785748.1,
INSD:BP799168.1,INSD:CB255585.1,INSD:CK119065.1,
INSD:EG453626.1,INSD:BP599871.1,INSD:EG495745.1,
INSD:BP799328.1,INSD:AV556879.1,INSD:AU237309.1,
INSD:BP572529.1,INSD:AV559755.1,INSD:EG479422.1,
INSD:EL138589.1,INSD:BP806505.1,INSD:EH822098.1,
INSD:EH843104.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK228801.1"
/note="ATPase, AAA-type, CDC48 protein; FUNCTIONS IN:
hydrolase activity, nucleoside-triphosphatase activity,
binding, nucleotide binding, ATP binding; INVOLVED IN:
response to cadmium ion; LOCATED IN: cytosol, nucleolus,
plasma membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593),
ATPase, AAA-type, core (InterPro:IPR003959), ATPase,
AAA-type, conserved site (InterPro:IPR003960), Aspartate
decarboxylase-like fold (InterPro:IPR009010), Cell
division protein 48, CDC48, domain 2 (InterPro:IPR004201),
ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338),
ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST
Arabidopsis thaliana protein match is: ATPase, AAA-type,
CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to
38860 proteins in 3301 species: Archae - 1748; Bacteria -
29009; Metazoa - 8678; Fungi - 6310; Plants - 5885;
Viruses - 85; Other Eukaryotes - 14559 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G53230"
/db_xref="Araport:AT3G53230"
intron_pos 10:2 (1/5)
intron_pos 66:0 (2/5)
intron_pos 142:1 (3/5)
intron_pos 398:0 (4/5)
intron_pos 590:0 (5/5)
BEGIN
1 MANQAESSDS KGTKKDFSTA ILEKKKAANR LVVDEAINDD NSVVSLHPDT MEKLQLFRGD
61 TILIKGKKRK DTVCIALADE TCDEPKIRMN KVVRSNLRVR LGDVISVHQC PDVKYGNRVH
121 ILPLDDTIEG VSGNIFDAYL KPYFLEAYRP VRKGDLFLVR GGMRSIEFKV IETDPAEYCV
181 VAPDTEIFCE GEPIKREDEE RLDEVGYDDV GGVRKQMAQI RELVELPLRH PQLFKSIGVK
241 PPKGILLYGP PGSGKTLIAR AVANETGAFF FCINGPEIMS KLAGESESNL RKAFEEAEKN
301 APSIIFIDEI DSIAPKREKT HGEVERRIVS QLLTLMDGLK SRAHVIVMGA TNRPNSIDPA
361 LRRFGRFDRE IDIGVPDEIG RLEVLRIHTK NMKLAEDVDL ERVSKDTHGY VGADLAALCT
421 EAALQCIREK MDVIDLDDEE IDAEILNSMA VSNDHFQTAL GNSNPSALRE TVVEVPNVSW
481 EDIGGLENVK RELQETVQYP VEHPEKFEKF GMSPSKGVLF YGPPGCGKTL LAKAIANECQ
541 ANFISIKGPE LLTMWFGESE ANVREIFDKA RQSAPCVLFF DELDSIATQR GNSVGDAGGA
601 ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDPALLRP GRLDQLIYIP LPDEESRYQI
661 FKSCLRKSPV AKDVDLRALA KYTQGFSGAD ITEICQRSCK YAIRENIEKD IEKERKRAES
721 PEAMEEDEEE IAEIKAGHFE ESMKYARRSV SDADIRKYQA FAQTLQQSRG FGSEFRFPDA
781 PTGTTGAFPG AAATVGGVDP FATSGGAADD DDLYS
//