LOCUS AEE78949.1 208 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family protein.
ACCESSION CP002686-7364
PROTEIN_ID AEE78949.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G52470"
/inference="Similar to RNA sequence,
EST:INSD:EH940585.1,INSD:EL120625.1,INSD:F19856.1,
INSD:EL151721.1,INSD:EH908381.1,INSD:AV823619.1,
INSD:DR257234.1,INSD:BP665336.1,INSD:DR257235.1,
INSD:EL301082.1,INSD:AV442450.1,INSD:AV554557.1,
INSD:EG512636.1,INSD:EH918308.1,INSD:AV549463.1,
INSD:AV553921.1,INSD:DR257231.1,INSD:EL110088.1,
INSD:DR378236.1,INSD:AV540412.1,INSD:AV784623.1,
INSD:EG520909.1,INSD:DR257233.1,INSD:AI992510.1,
INSD:EL140714.1,INSD:EL302417.1,INSD:EH942625.1,
INSD:EG506136.1,INSD:EG506800.1,INSD:EL182678.1,
INSD:ES055798.1,INSD:EG506802.1,INSD:EG506138.1,
INSD:DR257237.1,INSD:EH960070.1,INSD:EL139207.1,
INSD:AV441212.1,INSD:ES157094.1,INSD:EH957989.1,
INSD:AV537531.1,INSD:EH929930.1,INSD:EL243328.1,
INSD:AV545215.1,INSD:EL060914.1,INSD:EG520910.1,
INSD:EH835741.1,INSD:BP777608.1,INSD:EL224153.1,
INSD:DR257229.1,INSD:EL148455.1,INSD:EL191719.1,
INSD:AV553358.1,INSD:EH857371.1,INSD:EH989673.1,
INSD:DR257230.1,INSD:EH907363.1,INSD:DR257236.1,
INSD:EL336561.1,INSD:DR257232.1,INSD:AV551887.1,
INSD:BP629270.1,INSD:EL021117.1,INSD:EL042923.1,
INSD:AV544832.1,INSD:EL014834.1,INSD:EL175432.1,
INSD:EL182739.1,INSD:EL332740.1,INSD:EL026903.1,
INSD:AV553182.1,INSD:T21130.1,INSD:EH888335.1,
INSD:EL015309.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080785.1,INSD:BX842168.1,INSD:AY088695.1,
INSD:AY114041.1"
/note="Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late
embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: NDR1/HIN1-like 12 (TAIR:AT2G35960.1); Has 921
Blast hits to 921 proteins in 29 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 921;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G52470"
/db_xref="Araport:AT3G52470"
BEGIN
1 MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL
61 SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ ITLRTAIPPT YQGHKEVNVW
121 SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI
181 NLGNKAAGVL VGDNAVKYTL ANKCSVNV
//