LOCUS AEE78896.1 443 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SWAP (Suppressor-of-White-APricot)
/surp domain-containing protein / D111/G-patch domain-
containing protein protein.
ACCESSION CP002686-7295
PROTEIN_ID AEE78896.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G52120"
/inference="Similar to RNA sequence,
EST:INSD:ES076294.1,INSD:BP806611.1,INSD:AV804628.1,
INSD:DR343154.1,INSD:AV831947.1,INSD:EL983025.1,
INSD:AV812512.1,INSD:EH857954.1,INSD:BP804463.1,
INSD:BP561310.2,INSD:EL084793.1,INSD:DR371583.1,
INSD:BP620238.1,INSD:BP560746.2,INSD:ES208409.1,
INSD:ES047529.1,INSD:DR343156.1,INSD:EH807498.1,
INSD:DR373287.1,INSD:ES005089.1,INSD:EG444266.1,
INSD:DR343155.1,INSD:BP843436.1,INSD:EH875441.1,
INSD:BP833935.1,INSD:EG444255.1,INSD:EL090038.1,
INSD:EL166090.1,INSD:EL254045.1,INSD:EL260153.1,
INSD:ES209250.1,INSD:BP810861.1,INSD:ES182990.1,
INSD:AV796312.1,INSD:AV803673.1,INSD:AV788323.1,
INSD:ES064037.1,INSD:EL198300.1,INSD:ES212032.1,
INSD:EL036505.1,INSD:BP784301.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822893.1,INSD:AY037259.1,INSD:AY094004.1"
/note="SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / D111/G-patch domain-containing
protein; FUNCTIONS IN: RNA binding, nucleic acid binding;
INVOLVED IN: RNA processing; LOCATED IN: intracellular;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp
(InterPro:IPR000061), D111/G-patch (InterPro:IPR000467);
Has 1460 Blast hits to 1340 proteins in 171 species:
Archae - 0; Bacteria - 0; Metazoa - 1005; Fungi - 124;
Plants - 274; Viruses - 0; Other Eukaryotes - 57 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G52120"
/db_xref="Araport:AT3G52120"
intron_pos 130:1 (1/7)
intron_pos 172:2 (2/7)
intron_pos 208:1 (3/7)
intron_pos 262:1 (4/7)
intron_pos 311:1 (5/7)
intron_pos 376:1 (6/7)
intron_pos 436:0 (7/7)
BEGIN
1 MDKGAPPSIF VNDGSFMERF RQLQQEKDKD KDKVVQVEDS KPVKIISNPK PAANKISIGL
61 KPNDAQKKGG KLAFSLKQKS KLLAPPVKLG TEEDEDDEDV KHEQGFGSVK RQKLEQRDTP
121 VKSAKVSDVA PPPPSDPTVK KVADKLASFV AKHGRPFEHI TRQKNPGDTP FKFLFDENCA
181 DYKYYVFRLA EEEKLISQTK DSGVLHSGDA GSRTSTAAIP LQKPAYQQTG YQIPASALYD
241 TPVEPGASSR SAQASITRPS DSDSFSGPRG ADPLSMMEFY MKKAAQEEKM RRPRQSKDEM
301 PPPASLQGPS ETSSTDPGKR GHHMGDYIPL EELDKFLSKC NDAAAQKATK EAAEKAKIQA
361 DNVGHKLLSK MGWKEGEGIG SSRKGMADPI MAGDVKTNNL GVGASAPGEV KPEDDIYEQY
421 KKRMMLGYKH RPNPLGNPRK AYY
//