LOCUS AEE78888.1 801 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cation/hydrogen exchanger 28 protein.
ACCESSION CP002686-7279
PROTEIN_ID AEE78888.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="chx28"
/locus_tag="AT3G52080"
/gene_synonym="cation/hydrogen exchanger 28"
/inference="Similar to RNA sequence, EST:INSD:AV814665.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY140034.1"
/note="cation/hydrogen exchanger 28 (chx28); FUNCTIONS IN:
monovalent cation:hydrogen antiporter activity; INVOLVED
IN: cation transport; LOCATED IN: membrane; EXPRESSED IN:
male gametophyte, flower, pollen tube, leaf; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage,
4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+
exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana
protein match is: cation/hydrogen exchanger 15
(TAIR:AT2G13620.1); Has 2845 Blast hits to 2827 proteins
in 865 species: Archae - 172; Bacteria - 1868; Metazoa -
0; Fungi - 124; Plants - 540; Viruses - 0; Other
Eukaryotes - 141 (source: NCBI BLink)."
/db_xref="TAIR:AT3G52080"
/db_xref="Araport:AT3G52080"
intron_pos 58:0 (1/3)
intron_pos 393:0 (2/3)
intron_pos 595:0 (3/3)
BEGIN
1 MNSTTTKNVC GDKWYLNLDR PEEALKILVF IAIFVVRTLL HYLMKPLGQP YLTTDFAIGL
61 ILGNIPRFRG AFSGPYSITL NNIIEFGMIC HMFVMGLEMN PSVLLRPPTK DAFIAYTSMI
121 TTFVLAFVTT PFLHYTKTSP YIFSLALSLM ASSTGSPILT RVIANLKIRK SDLGKLASAA
181 GVHTDMISTL LYCFGFIFFP TEKPLARPLH RFFRALLMFC LFLAQVTFTS IVSPIFLNWV
241 NNENPEGKPL KGSHLVMSLA FVVLICSFPT WPPESMYNPI LSAFTAGLFL PNKGRMSKWI
301 INKINYLLST VFYPIFFFWV GFIIHMRNFD ITDKMAWVRF FSLLGTVIAG KVTGTVLCGL
361 LLGYHVPETA SLGLLLTTKG HFHVYLAALA IRTNRVKSTT GALIIFIIVF TVVYSPFVVM
421 DIIKRARKRV PVHIMALQWL DPTTELRILI GLHGPHNIGS TLNVMEICHG GREPGSIFYA
481 TDMVELTDEI AATLKKGGGA GQSNDSVTVT DRSVTEMRES ITAAVNGYGE LRNGQGVTVR
541 RMLALSTFVT MAHDVCGLAD ELMVSIIILP FHKRLNPDGT LDAGHAGFRH VNRKILKNAP
601 CSVGILVDRS FGQTEEAWRP GASMGIAIIF IGGRDDREAL AFAAQVARHP AVKLKVIRFL
661 EDKSSQNAQK RSSILNRASV VDQEEEMKLD DECFAEFYER YIAGGGRVSY MEKHLTNSSE
721 TFTALKSLDG EYGLVIVGRG GGRASSGLTT GLNDWQQCPE LGPIGDVLSG SDFSHNTSML
781 IIQQQRTRGQ LEGLHDDFTI L
//