LOCUS AEE78812.1 230 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ATP-dependent helicase/deoxyribonuclease
subunit B protein.
ACCESSION CP002686-7188
PROTEIN_ID AEE78812.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="NPU"
/locus_tag="AT3G51610"
/gene_synonym="NO PRIMEXINE AND PLASMA MEMBRANE
UNDULATION"
/gene_synonym="T18N14.2"
/inference="Similar to RNA sequence,
EST:INSD:DR308308.1,INSD:DR308314.1,INSD:EL052900.1,
INSD:EH906230.1,INSD:EH822101.1,INSD:EL238600.1,
INSD:DR308312.1,INSD:EG490007.1,INSD:DR308313.1,
INSD:EH899314.1,INSD:EG490018.1,INSD:ES180066.1,
INSD:BP661779.1,INSD:AV814472.1,INSD:EH951566.1,
INSD:ES026435.1,INSD:DR308316.1,INSD:BP669586.1,
INSD:ES000034.1,INSD:ES127795.1,INSD:EL227869.1,
INSD:EL254547.1,INSD:DR308309.1,INSD:EL986454.1,
INSD:EL974721.1,INSD:N65287.1,INSD:BP627865.1,
INSD:EL128975.1,INSD:AV806320.1,INSD:DR371493.1,
INSD:DR308305.1,INSD:DR308310.1,INSD:AI997968.1,
INSD:AA712817.1,INSD:DR308307.1,INSD:BP796572.1,
INSD:DR308306.1,INSD:ES149380.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227141.1,INSD:BT006266.1,INSD:AY088686.1,
INSD:AJ238805.1,INSD:BX826164.1,INSD:AY136426.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: response to oxidative stress;
LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; Has 53
Blast hits to 53 proteins in 21 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink)."
/db_xref="TAIR:AT3G51610"
/db_xref="Araport:AT3G51610"
intron_pos 51:0 (1/8)
intron_pos 72:0 (2/8)
intron_pos 90:2 (3/8)
intron_pos 122:0 (4/8)
intron_pos 142:1 (5/8)
intron_pos 169:2 (6/8)
intron_pos 188:1 (7/8)
intron_pos 209:2 (8/8)
BEGIN
1 MAGMAAVAGL RPWNAFIQAL VLISLSFPFL SSAYRPGDIV RMSKMGQYHS SRTTWHDVIG
61 KHCPIFAVNR EVLIPIAKPI GYTGTDPYKI KFQVGSEKFL IHWLLVINRK SSEVPMIDVN
121 LRYSGGDLLG VTAQVIDMPH SYLNTHPEIR KQFWDPQHWP KHVLVRYTWK EQSEIDVSSG
181 FYVLFGSALT FSFVLSIYVL QSSREKLARF VRETVVESSS MNVGEFGKGD
//