LOCUS AEE78795.1 597 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phosphoinositide phosphatase family
protein protein.
ACCESSION CP002686-7162
PROTEIN_ID AEE78795.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RHD4"
/locus_tag="AT3G51460"
/gene_synonym="ROOT HAIR DEFECTIVE 4"
/gene_synonym="ROOT HAIR DEFECTIVE4"
/inference="Similar to RNA sequence,
EST:INSD:EH911141.1,INSD:DR339634.1,INSD:DR339640.1,
INSD:BE528321.1,INSD:BX837099.1,INSD:BP868612.1,
INSD:DR339635.1,INSD:BP790906.1,INSD:BP834010.1,
INSD:BP844924.1,INSD:EH975425.1,INSD:AV798805.1,
INSD:EG489940.1,INSD:BP643029.1,INSD:DR339637.1,
INSD:BP815041.1,INSD:EH995120.1,INSD:EL141533.1,
INSD:BP646407.1,INSD:DR339633.1,INSD:AA651451.1,
INSD:DR339641.1,INSD:DR376069.1,INSD:BP782811.1,
INSD:ES025863.1,INSD:EH973836.1,INSD:CA781850.1,
INSD:EL103704.1,INSD:ES132547.1,INSD:EH886079.1,
INSD:BP669170.1,INSD:BE524142.1,INSD:EL339080.1,
INSD:ES108913.1,INSD:DR339638.1,INSD:CK120786.1,
INSD:AV527378.1,INSD:R90342.1,INSD:BX834238.1,
INSD:EL331738.1,INSD:EL163556.1,INSD:ES089399.1,
INSD:BP816098.1,INSD:EL194085.1,INSD:DR339636.1,
INSD:EL168159.1,INSD:DR339642.1,INSD:BP832561.1,
INSD:DR339639.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY227250.1,INSD:AY040078.1,INSD:AF266459.1,
INSD:BX824362.1,INSD:AK229963.1,INSD:AF360267.1"
/note="ROOT HAIR DEFECTIVE4 (RHD4); FUNCTIONS IN:
phosphatidylinositol-4,5-bisphosphate 5-phosphatase
activity, phosphatidylinositol-4-phosphate phosphatase
activity; INVOLVED IN: root hair cell tip growth; LOCATED
IN: plasma membrane of cell tip, plasma membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin,
N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana
protein match is: Phosphoinositide phosphatase family
protein (TAIR:AT5G66020.1); Has 1757 Blast hits to 1639
proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa
- 573; Fungi - 593; Plants - 286; Viruses - 0; Other
Eukaryotes - 305 (source: NCBI BLink)."
/db_xref="TAIR:AT3G51460"
/db_xref="Araport:AT3G51460"
intron_pos 49:1 (1/19)
intron_pos 77:1 (2/19)
intron_pos 120:0 (3/19)
intron_pos 150:2 (4/19)
intron_pos 170:0 (5/19)
intron_pos 189:0 (6/19)
intron_pos 200:1 (7/19)
intron_pos 227:1 (8/19)
intron_pos 263:0 (9/19)
intron_pos 292:0 (10/19)
intron_pos 318:0 (11/19)
intron_pos 341:2 (12/19)
intron_pos 374:2 (13/19)
intron_pos 408:0 (14/19)
intron_pos 444:1 (15/19)
intron_pos 468:2 (16/19)
intron_pos 500:0 (17/19)
intron_pos 531:0 (18/19)
intron_pos 553:1 (19/19)
BEGIN
1 METVDSRNKL HSRLRLWEFP DQYIIEPADG SGSSCLDISR VDASMKLIDQ VPESNSVRVP
61 KIRSIFGVVG MLKLLAGSYL VVVTESERVG SFLGHPIFKV TTLKVLPCDH SLKNSPEEQK
121 KMETEFSKLL SVAEKTTGLY FSYEVNLTLS SQRLHEMGDE SKSLPLWRQA EPRFLWNNYM
181 LEVLIDNKLD QFLLPVIQGS FNSFETAIGR DIVDITLIAR RCTRRNGTRM WRRGADLDGY
241 VANFVETEQI VQMNGYTSSF VQVRGSMPFM WEQVVDLTYK PKFEIVQPEE AKRIAERHFL
301 DLRKKYGSVL AVDLVNKQGG EGRLCEKYAT VMQHITGDDI RYLHFDFHQI CGHIHFERLS
361 ILYEQIEGFL EKNGYFLLNE KGEKMKEQLG VVRSNCIDCL DRTNVTQSMI GRKMLEVQLK
421 RIGVFGAEET ISSHLNFDEH YKILWANHGD EISIQYSGTP ALKGDFVRYG HRTAHGVLKD
481 GWSSLRRYYL NNFADGTKQD AIDLLQGHYI VAVSRDMAPV PQKGGLEAVA NFPVALFVVL
541 MSFWFATMSL KQTGSDYKHK HLFFSLLWTG ICVGMAALVR ANGRIFCNRP RLHKPRG
//