LOCUS AEE78773.1 430 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-7123
PROTEIN_ID AEE78773.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G51280"
/inference="Similar to RNA sequence,
EST:INSD:ES089284.1,INSD:DR380819.1,INSD:ES011405.1,
INSD:ES152188.1,INSD:EL189872.1,INSD:BP563761.1,
INSD:BP801449.1,INSD:BP576749.1,INSD:ES051917.1,
INSD:H77068.1,INSD:BP614752.1,INSD:EL022320.1,
INSD:BP610814.1,INSD:DR369162.1,INSD:ES180867.1,
INSD:EL181097.1,INSD:BP620950.1,INSD:AU226680.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823185.1,INSD:BX824731.1,INSD:AF031608.1,
INSD:BX822588.1,INSD:AK227990.1,INSD:BT006438.1,
INSD:BX824948.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Tetratricopeptide TPR-1
(InterPro:IPR001440), Tetratricopeptide-like helical
(InterPro:IPR011990), Tetratricopeptide repeat-containing
(InterPro:IPR013026), Tetratricopeptide repeat
(InterPro:IPR019734); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725
proteins in 125 species: Archae - 8; Bacteria - 246;
Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other
Eukaryotes - 460 (source: NCBI BLink)."
/db_xref="TAIR:AT3G51280"
/db_xref="Araport:AT3G51280"
intron_pos 51:0 (1/3)
intron_pos 122:0 (2/3)
intron_pos 174:0 (3/3)
BEGIN
1 MMRDVFRPTK SAPCSPAKPL GISRTQSESF HAIHKVPVGD SPYVRAKNVQ LVEKDPERAI
61 PLFWKAINAG DRVDSALKDM AIVMKQQNRA EEAIEAIKSL RVRCSDQAQE SLDNILLDLY
121 KRCGRLDDQI GLLKHKLFLI QKGLAFNGKR TKTARSQGKK FQVSVEQEAT RLLGNLGWAL
181 MQRDNFVEAE DAYRRALSIA PDNNKMCNLG ICLMKQGRID EAKETLRRVK PAVVDGPRGV
241 DSHLKAYERA QQMLNDLGSE MMRRGGDDKV EQRRLFDAIF GSSSIWQPQP CSEQTVKAKP
301 KPGLSNGDGY GDENVKMSVN PVVVNPLRVD AKPFFSSKLV ISNNEKLKRT RSSSQGMGML
361 SGIGGDHEGE TNTSTRRRLS MEKKATECGL PDNKDFEDAI MAAVLGTETK VDKKRLKVFQ
421 DITLCLNQSL
//