LOCUS AEE78760.1 521 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type
family protein protein.
ACCESSION CP002686-7107
PROTEIN_ID AEE78760.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G51180"
/inference="Similar to RNA sequence,
EST:INSD:CB262546.1,INSD:CB262745.1,INSD:BP561690.2,
INSD:ES002063.1,INSD:AV797478.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000512.1,INSD:AY037185.1,INSD:BX823250.1"
/note="Zinc finger C-x8-C-x5-C-x3-H type family protein;
FUNCTIONS IN: zinc ion binding, nucleic acid binding;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type
(InterPro:IPR000571); BEST Arabidopsis thaliana protein
match is: Zinc finger C-x8-C-x5-C-x3-H type family protein
(TAIR:AT5G66270.1); Has 424 Blast hits to 373 proteins in
113 species: Archae - 0; Bacteria - 48; Metazoa - 106;
Fungi - 68; Plants - 146; Viruses - 3; Other Eukaryotes -
53 (source: NCBI BLink)."
/db_xref="TAIR:AT3G51180"
/db_xref="Araport:AT3G51180"
intron_pos 23:0 (1/3)
intron_pos 84:0 (2/3)
intron_pos 125:2 (3/3)
BEGIN
1 MNNMKRSKKP RVSWPPGPKL CQVKVFRTED SPANVASQPQ RHSYPSRKPR GPDLPPGFEG
61 NHYAVKPNVS NIPRIKWKRP PPKFSVNDTW LVGCGGGSSE WQNENLRISK VLEAIYPHRS
121 AIPSRPSVSP AVEAECFDDS KTPAIRLTPI EDESESSSEE SSNSKVESGV TANKQGQLET
181 KPLCSTQEQV SGLTGLAPDL SLAASAALTA LMKTKEQGSL VDTELLIKFL SDPKLIKNLI
241 TDTSGKSSET KNQPIVTNIN SATRPVPQPV SAVTASPMAR KPQPVIIPQE HSVAVSRSFT
301 NPERRVSPPK PVNGSISPPK PITGKPSSIP MPVHFHVGIA KEQPQPARFP SSSLPMNLNF
361 HRPPNVFSEP KVIVNPQPQH QPYSAFRTSE MNYVQSSIGL GRGPQTGFNS YPMNFSRADA
421 IGSAKPVVQP MKGLDYFKNL IREHGTDNHE TNQYHSQTGI FNGRIDNNNK IHQQCIYFGT
481 ANGCNMGDSC TYVHDRYRPN FEAAAPRAKR MKFGRYERNG F
//