LOCUS AEE78752.1 413 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-7095
PROTEIN_ID AEE78752.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G51110"
/inference="Similar to RNA sequence,
EST:INSD:EL098160.1,INSD:BP647162.1,INSD:EH876954.1,
INSD:EL997391.1,INSD:AV792042.1,INSD:BP606512.1,
INSD:BP810652.1,INSD:BE524124.1,INSD:BP602435.1,
INSD:ES207728.1,INSD:CB262136.1,INSD:EL064463.1,
INSD:EL969488.1,INSD:EL289519.1,INSD:AV791372.1,
INSD:BP840361.1,INSD:EH902020.1,INSD:AV825480.1,
INSD:EL071182.1,INSD:EG457834.1,INSD:ES208132.1,
INSD:BP601023.1,INSD:BE523924.1,INSD:ES203537.1,
INSD:AY091404.1,INSD:BP824339.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY050992.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 12 growth stages;
CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical
(InterPro:IPR011990), RNA-processing protein, HAT helix
(InterPro:IPR003107), Tetratricopeptide repeat-containing
(InterPro:IPR013026); BEST Arabidopsis thaliana protein
match is: crooked neck protein, putative / cell cycle
protein, putative (TAIR:AT5G41770.1); Has 4310 Blast hits
to 1959 proteins in 231 species: Archae - 3; Bacteria -
10; Metazoa - 1644; Fungi - 1320; Plants - 755; Viruses -
0; Other Eukaryotes - 578 (source: NCBI BLink)."
/db_xref="TAIR:AT3G51110"
/db_xref="Araport:AT3G51110"
BEGIN
1 MMMIPRMVKN KTPAPVQITA EQVLKEARER EDSRILRPPK QKITDSDELA EYRLRRRKEF
61 EDQIRGAKTN SQVWVRYADW EESQKDHDRA RSVWERALED ESYRNHTLWL KYAEFEMRNK
121 SVNHARNVWD RAVKILPRVD QFWYKYIHME EILGNIDGAR KIFERWMDWS PDQQAWLCFI
181 KFELRYNEIE RSRSIYERFV LCHPKASSFI RYAKFEMKNS QVSLARIVYE RAIEMLKDVE
241 EEAEMIFVAF AEFEELCKEV ERARFLYKYA LDHIPKGRAE DLYKKFVAFE KQYGNKEGID
301 DAIVGRRKLQ YEGEVRKNPL NYDSWFDYIS LEETLGDKDR IREVYERAIA NVPLAEEKRY
361 WQRYIYLWID YALFEEILAE DVERTRAVYR ECLNLIPSLQ ILFCQDMVAR CTV
//