LOCUS AEE78747.1 312 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GATA transcription factor 6 protein.
ACCESSION CP002686-7089
PROTEIN_ID AEE78747.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GATA6"
/locus_tag="AT3G51080"
/gene_synonym="GATA transcription factor 6"
/inference="Similar to RNA sequence,
EST:INSD:EH817291.1,INSD:ES014446.1,INSD:BP665275.1,
INSD:ES194716.1,INSD:EL190158.1,INSD:EH917916.1,
INSD:BP595479.1,INSD:AV800405.1,INSD:DR751570.1,
INSD:BP827591.1,INSD:EH939065.1,INSD:EL215768.1,
INSD:ES006223.1,INSD:EH845114.1,INSD:EH820169.1,
INSD:EL975955.1,INSD:EL228317.1,INSD:CB260768.1,
INSD:AV828107.1,INSD:ES193319.1,INSD:EL315994.1,
INSD:EL206167.1,INSD:EL993239.1,INSD:CK119460.1,
INSD:EL977655.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY064048.1,INSD:AY117315.1,INSD:BX822494.1"
/note="GATA transcription factor 6 (GATA6); CONTAINS
InterPro DOMAIN/s: Zinc finger, NHR/GATA-type
(InterPro:IPR013088), Transcription factor, GATA, plant
(InterPro:IPR016679), Zinc finger, GATA-type
(InterPro:IPR000679); BEST Arabidopsis thaliana protein
match is: GATA transcription factor 5 (TAIR:AT5G66320.2);
Has 1500 Blast hits to 1468 proteins in 185 species:
Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 554;
Plants - 766; Viruses - 0; Other Eukaryotes - 70 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G51080"
/db_xref="Araport:AT3G51080"
intron_pos 87:0 (1/1)
BEGIN
1 MESVELTLKN SNMKDKTLTG GAQNGDDFSV DDLLDFSKEE EDDDVLVEDE AELKVQRKRG
61 VSDENTLHRS NDFSTADFHT SGLSVPMDDI AELEWLSNFV DDSSFTPYSA PTNKPVWLTG
121 NRRHLVQPVK EETCFKSQHP AVKTRPKRAR TGVRVWSHGS QSLTDSSSSS TTSSSSSPRP
181 SSPLWLASGQ FLDEPMTKTQ KKKKVWKNAG QTQTQTQTQT RQCGHCGVQK TPQWRAGPLG
241 AKTLCNACGV RYKSGRLLPE YRPACSPTFS SELHSNHHSK VIEMRRKKET SDGAEETGLN
301 QPVQTVQVVS SF
//