LOCUS AEE78715.1 203 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cold-regulated 413-plasma membrane 2 protein.
ACCESSION CP002686-7053
PROTEIN_ID AEE78715.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="COR413-PM2"
/locus_tag="AT3G50830"
/gene_synonym="ATCOR413-PM2"
/gene_synonym="cold-regulated 413-plasma membrane 2"
/inference="Similar to RNA sequence,
EST:INSD:DR230112.1,INSD:AV440978.1,INSD:EG483250.1,
INSD:DR230122.1,INSD:DR230115.1,INSD:EG483312.1,
INSD:EL288458.1,INSD:DR230114.1,INSD:ES071664.1,
INSD:BP842699.1,INSD:T21474.1,INSD:DR230111.1,
INSD:EH819726.1,INSD:AI993987.1,INSD:DR230119.1,
INSD:EL085238.1,INSD:BP629884.1,INSD:EH967475.1,
INSD:EG426441.1,INSD:EH974877.1,INSD:DR230113.1,
INSD:EL069713.1,INSD:EG483325.1,INSD:EL340200.1,
INSD:EG483253.1,INSD:EL031047.1,INSD:EH982905.1,
INSD:AV827418.1,INSD:EL105987.1,INSD:AA712139.1,
INSD:EL273367.1,INSD:DR230110.1,INSD:BP580386.1,
INSD:EL309822.1,INSD:BP846988.1,INSD:W43138.1,
INSD:AV788814.1,INSD:EL143234.1,INSD:EG426430.1,
INSD:ES028716.1,INSD:CB260187.1,INSD:EH921619.1,
INSD:EH903498.1,INSD:DR230116.1,INSD:AV533210.1,
INSD:EG483328.1,INSD:AV798172.1,INSD:EL336706.1,
INSD:DR230118.1,INSD:EH797042.1,INSD:EH940803.1,
INSD:EH860372.1,INSD:EL020599.1,INSD:EL317400.1,
INSD:ES031081.1,INSD:EG483277.1,INSD:EL225994.1,
INSD:AV566868.1,INSD:AA657324.1,INSD:DR230120.1,
INSD:EG483266.1,INSD:EL238664.1,INSD:EL080526.1,
INSD:DR230121.1,INSD:EL148189.1,INSD:EG483322.1,
INSD:DR230109.1,INSD:AA657303.1,INSD:AV442689.1,
INSD:Z37671.1,INSD:EL323179.1,INSD:EL247211.1,
INSD:EG483332.1,INSD:EL312550.1,INSD:BP599589.1,
INSD:EH808711.1,INSD:EL086539.1,INSD:EL003701.1,
INSD:DR230117.1,INSD:T45633.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823449.1,INSD:AF360305.1,INSD:AF283005.1,
INSD:AY056356.1,INSD:BX823447.1"
/note="cold-regulated 413-plasma membrane 2 (COR413-PM2);
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: plasma membrane; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Cold acclimation
WCOR413 (InterPro:IPR008892); BEST Arabidopsis thaliana
protein match is: Cold acclimation protein WCOR413 family
(TAIR:AT4G37220.1); Has 158 Blast hits to 155 proteins in
30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi -
0; Plants - 156; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G50830"
/db_xref="Araport:AT3G50830"
intron_pos 60:2 (1/3)
intron_pos 96:2 (2/3)
intron_pos 120:1 (3/3)
BEGIN
1 MGRMDYLAMK TDDVDTVALV NSDMEELKVA AKKLFSDVSK LGGLGFGVSF LKFLASFAAI
61 YLLILDRTNW KTKMLTSLLI PYIFLSLPSV IFNFLSGDVG KWIAFVAVVL RLFFPKHFPD
121 WLEMPGSLIL LLVVSPHFLA HHIRGTWIGT VISLFIGCYL LQEHIRASGG FRNSFTQPRG
181 VSNTLGIILL LVYPVWALIV RVM
//