LOCUS AEE78684.1 1614 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002686-7018
PROTEIN_ID AEE78684.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G50590"
/gene_synonym="AT3G50600"
/inference="Similar to RNA sequence,
EST:INSD:DR279294.1,INSD:EL339341.1,INSD:AV554901.1,
INSD:EG526033.1,INSD:BG459572.1,INSD:AV565365.1,
INSD:EG418916.1,INSD:EL334027.1,INSD:AV530276.1,
INSD:AV524369.1,INSD:EL067427.1,INSD:AV546254.1,
INSD:AV546977.1,INSD:AV524287.1,INSD:AV559026.1,
INSD:ES004245.1,INSD:EL207308.1,INSD:EL986306.1,
INSD:AV548486.1,INSD:DR379952.1,INSD:BP561559.1,
INSD:N65173.1,INSD:EG427853.1,INSD:DR279297.1,
INSD:ES208945.1,INSD:EH865867.1,INSD:ES150646.1,
INSD:Z35608.1,INSD:AI999681.1,INSD:ES083578.1,
INSD:EL156387.1,INSD:EL984189.1,INSD:ES066214.1,
INSD:BP601463.1,INSD:EG426857.1,INSD:EH853890.1,
INSD:EG426856.1,INSD:DR279296.1,INSD:EL987560.1,
INSD:AV794140.1,INSD:EG418917.1,INSD:BP605497.1,
INSD:BP613784.1,INSD:BG459421.1,INSD:EL282602.1,
INSD:EG428135.1,INSD:AV543406.1,INSD:Z33869.1,
INSD:ES137060.1,INSD:AV524121.1,INSD:DR279293.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY059765.1,INSD:BT005799.1,INSD:BX824558.1"
/note="Transducin/WD40 repeat-like superfamily protein;
FUNCTIONS IN: nucleotide binding; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680), WD40 repeat, subgroup
(InterPro:IPR019781); Has 1315 Blast hits to 1225 proteins
in 269 species: Archae - 0; Bacteria - 270; Metazoa - 540;
Fungi - 221; Plants - 139; Viruses - 13; Other Eukaryotes
- 132 (source: NCBI BLink)."
/db_xref="TAIR:AT3G50590"
/db_xref="Araport:AT3G50590"
intron_pos 46:1 (1/24)
intron_pos 83:0 (2/24)
intron_pos 138:1 (3/24)
intron_pos 172:0 (4/24)
intron_pos 196:1 (5/24)
intron_pos 241:2 (6/24)
intron_pos 295:1 (7/24)
intron_pos 337:0 (8/24)
intron_pos 370:1 (9/24)
intron_pos 400:2 (10/24)
intron_pos 418:0 (11/24)
intron_pos 452:0 (12/24)
intron_pos 501:0 (13/24)
intron_pos 555:1 (14/24)
intron_pos 632:1 (15/24)
intron_pos 684:0 (16/24)
intron_pos 714:0 (17/24)
intron_pos 736:2 (18/24)
intron_pos 774:1 (19/24)
intron_pos 839:2 (20/24)
intron_pos 877:0 (21/24)
intron_pos 928:2 (22/24)
intron_pos 1392:0 (23/24)
intron_pos 1457:0 (24/24)
BEGIN
1 MEWATVQHLD LRHVGRGVSK PLQPHTAAFH PSQAVIAVAV GSHIMEFDAL TGCKIASIDI
61 GSPAVRMLYS PTSSNAVVAI LEDCTIRSCD FETEQTCVLH SPEKRSEHIS SDTEVHLAVT
121 PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI
181 RAYNIHTYAV HYTLQLDNTI KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG
241 ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
301 IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA
361 VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG QSQLTISDIA RKAFLYSHFM
421 EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN
481 LMAHNLCSGT DNIYKKLYTS IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN
541 TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
601 NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG
661 HYISTQGEGR KSIKLKKHEI ALQSFYSLPF NVVYIWPVLF EIKTIMFRKL TRHVQWQETP
721 RGYVAGILTT QRVLMVSLLW VGPALLFSTT TAVCLLGWDG KVRTILSIST PYAALVGALN
781 DRLLLAHPTD ISPKQKKGIE IKSCLVGLLE PLLIGFSTMQ QTFEQKVDLS EILYQITTRF
841 DSLRITPRSL DILARSAPVC GDLAVSLAQA GPQFNQVLRC AYAIKALRFS TALSVLKDEF
901 LRSRDYPKCP PTSLLFQRFR QLGYACIKYG QFDSAKETFE VIGDYESMLD LFICHLNPSA
961 MRRLAQKLEE ESGDPELRRY CERILRVRST GWTQGIFANF AAESMVPKGP EWGGGNWEIK
1021 TPTDMKSIPK WELAGEVMPY MKNEDGTIPS IVADHIGVYL GCVKGRVNVV EIKEDSLVSK
1081 PGGLSLLGKP VSDKPLALPA GESSSMMGLE SLGKQNVADE QAKAAEEFKK TMYGATGDGS
1141 SSDEEGVTKP KKLQIRIREK PTSTTVDVNK LKEAAKTFKL GDGLGLTMSR TKSINAGSQD
1201 LGQMLSQPSS STVATTTAPS SASAPVDPFA MSSWTQQPQP VSQPAPPGVA APIPEDFFQN
1261 TIPSVEVAKT LPPPGTYLSK MDQAARAAIA AQGGPNQANN TPLPDIGLPD GGVPQQYPQQ
1321 TSQQPGAPFQ TVGLPDGGVR QQYPGQNQVP SQVPVSTQPL DLSVLGVPNT GDSGKPPGQP
1381 QSPPASVRPG QVPRGAAAPV CFKTGLAHLE QNQLPDALSC FDEAFLALAK DQSRGADIKA
1441 QATICAQYKI AVTLLREILR LQRVQGASAL SAKDEMARLS RHLASLPLLA KHRINCIRTA
1501 IKRNMEVQNY GYSKQMLELL LSKAPASKQE ELRGLVDLCV QRGTSNKSID PLEDPSQLCS
1561 ATLSRLSTIG YDVCDLCGAK FAALSSPGCI ICGMGSIKRS DALAGPAPVS TPFG
//