LOCUS AEE78635.1 427 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF247) protein.
ACCESSION CP002686-6952
PROTEIN_ID AEE78635.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G50170"
/inference="Similar to RNA sequence,
EST:INSD:EG477635.1,INSD:EG477637.1,INSD:EG477634.1,
INSD:EG477679.1"
/inference="Similar to RNA sequence, mRNA:INSD:DQ446751.1"
/note="Plant protein of unknown function (DUF247);
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: shoot apex, embryo, flower,
pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature
embryo stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF247,
plant (InterPro:IPR004158); BEST Arabidopsis thaliana
protein match is: Plant protein of unknown function
(DUF247) (TAIR:AT3G50120.1); Has 905 Blast hits to 897
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 905; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G50170"
/db_xref="Araport:AT3G50170"
intron_pos 224:2 (1/1)
BEGIN
1 MVLVNVHSDG QPIIINKDML TWYLLSLKLR QKFQTKNQHS EPVQDPNLHG LPEVTRPNQD
61 QNVQNHKQSH SESGKEVVEE RPEETTGDSW VISIRDKLEQ ADRDDDTTIW GKLCIYRVPH
121 YLQENDKKSY FPQTVSLGPY HHGKKRLRPM ERHKWRALNK VLKRLKQRIE MYTNAMRELE
181 EKARACYEGP ISLSRNEFTE MLVLDGCFVL ELFRGTVEGF TEIGYARNDP VFAMRGLMHS
241 IQRDMIMLEN QLPLFVLDRL LELQLGTQNQ TGIVAHVAVK FFDPLMPTGE ALTKPDQSKL
301 MNWLEKSLDT LGDKGELHCL DVFRRSLLQS SPTPNTRSLL KRLTRNTRVV DKRQQQLVHC
361 VTELREAGVK FRKRKTDRFW DIEFKNGYLE IPKLLIHDGK LKGSLLIPFL LFIPYTYICL
421 YKNDIYL
//