LOCUS AEE78634.1 541 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF247) protein.
ACCESSION CP002686-6951
PROTEIN_ID AEE78634.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G50170"
/inference="Similar to RNA sequence,
EST:INSD:EG477635.1,INSD:EG448300.1,INSD:EG448294.1,
INSD:EG448299.1,INSD:EG448291.1,INSD:EG448297.1,
INSD:EG448292.1,INSD:EG477637.1,INSD:EG477634.1,
INSD:EG477679.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY735618.1"
/note="Plant protein of unknown function (DUF247);
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF247, plant (InterPro:IPR004158); BEST Arabidopsis
thaliana protein match is: Plant protein of unknown
function (DUF247) (TAIR:AT3G50120.1); Has 1185 Blast hits
to 1045 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 1185; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G50170"
/db_xref="Araport:AT3G50170"
intron_pos 224:2 (1/2)
intron_pos 399:1 (2/2)
BEGIN
1 MVLVNVHSDG QPIIINKDML TWYLLSLKLR QKFQTKNQHS EPVQDPNLHG LPEVTRPNQD
61 QNVQNHKQSH SESGKEVVEE RPEETTGDSW VISIRDKLEQ ADRDDDTTIW GKLCIYRVPH
121 YLQENDKKSY FPQTVSLGPY HHGKKRLRPM ERHKWRALNK VLKRLKQRIE MYTNAMRELE
181 EKARACYEGP ISLSRNEFTE MLVLDGCFVL ELFRGTVEGF TEIGYARNDP VFAMRGLMHS
241 IQRDMIMLEN QLPLFVLDRL LELQLGTQNQ TGIVAHVAVK FFDPLMPTGE ALTKPDQSKL
301 MNWLEKSLDT LGDKGELHCL DVFRRSLLQS SPTPNTRSLL KRLTRNTRVV DKRQQQLVHC
361 VTELREAGVK FRKRKTDRFW DIEFKNGYLE IPKLLIHDGT KSLFSNLIAF EQCHIESSNH
421 ITSYIIFMDN LINSSEDVSY LHYCGIIEHW LGSDSEVADL FNRLCQEVVF DPKDSHLSRL
481 SGDVNRYYNR KWNVLKATLT HKYFNNPWAY FSFSAAVILL LLTLCQSFYA VYAYYKPNSK
541 L
//