LOCUS AEE78632.1 509 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF247) protein.
ACCESSION CP002686-6948
PROTEIN_ID AEE78632.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G50150"
/inference="Similar to RNA sequence,
EST:INSD:EG486456.1,INSD:EG486466.1,INSD:EG494438.1,
INSD:EG494437.1,INSD:EG494439.1,INSD:EG486457.1,
INSD:EG486451.1,INSD:EG486471.1,INSD:EG486453.1,
INSD:EG486447.1,INSD:EG494436.1,INSD:EG486470.1,
INSD:EG486448.1,INSD:EG486467.1"
/inference="Similar to RNA sequence, mRNA:INSD:DQ446750.1"
/note="Plant protein of unknown function (DUF247);
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF247, plant (InterPro:IPR004158); BEST
Arabidopsis thaliana protein match is: Plant protein of
unknown function (DUF247) (TAIR:AT3G50170.1); Has 1158
Blast hits to 1035 proteins in 18 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1158;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G50150"
/db_xref="Araport:AT3G50150"
intron_pos 202:2 (1/2)
intron_pos 369:1 (2/2)
BEGIN
1 MVLFSDGRST STHKRYRRLS WFVPIHSFHE ITRRDLGQNL HNHVETYVEP SKIEVKEEKP
61 RETREEWVIS IKDKMEKALS YDATNSWDKL CIYRVPFYLQ ENDKKSYLPQ TVSIGPYHHG
121 KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML
181 VLDGCFVLEL FKGTIQGFQK IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG
241 LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301 SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK
361 IPKLLIHDGT KSLFSNLIAF EQCHTQSSNN ITSYIIFMDN LINSSQDVSY LHHDGIIEHW
421 LGSDSEVADL FNRLCKEVIF DPKDGYLSQL SREVNRYYSR KWNSLKATLR QKYFNNPWAY
481 FSFSAAVILL FLTFFQSFFA VYAYYKPLS
//