LOCUS AEE78628.1 531 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF247) protein.
ACCESSION CP002686-6943
PROTEIN_ID AEE78628.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G50120"
/inference="Similar to RNA sequence,
EST:INSD:EG506542.1,INSD:EG506642.1,INSD:EG506797.1,
INSD:EG506697.1,INSD:EG506753.1,INSD:EG504309.1,
INSD:EG506586.1,INSD:EG506764.1,INSD:EG506709.1,
INSD:EG506742.1,INSD:EG506720.1,INSD:EG506786.1,
INSD:EG506398.1,INSD:EG506564.1,INSD:EG504287.1,
INSD:EG506598.1,INSD:EG506609.1,INSD:EG506631.1,
INSD:EG506498.1,INSD:EG506775.1,INSD:EG506620.1,
INSD:EG506520.1,INSD:EG506487.1,INSD:EG506575.1,
INSD:EG506475.1,INSD:EG506731.1,INSD:EG504298.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY735617.1,INSD:AY924789.1"
/note="Plant protein of unknown function (DUF247);
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf apex, petal, leaf whorl, sepal,
flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF247, plant
(InterPro:IPR004158); BEST Arabidopsis thaliana protein
match is: Plant protein of unknown function (DUF247)
(TAIR:AT3G50170.1); Has 1189 Blast hits to 1046 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G50120"
/db_xref="Araport:AT3G50120"
intron_pos 214:2 (1/2)
intron_pos 391:1 (2/2)
BEGIN
1 MVAVFYKDML SWYLLTLKIR EKLETQNQES VLVNQDQNLP GLPEITRSDQ DQNIHNNQQT
61 QSDPAIYVIK ESPKDSRDDW VISITDKLEQ AHRDDDTTLW GKLCIYRVPY YLQENDNKSY
121 FPQTVSLGPY HHGKKRLRSM DRHKWRAVNR VLKRTNQGIK MYIDAMRELE EKARACYEGP
181 LSLSSNEFIE MLVLDGCFVL ELFRGAVEGF TELGYARNDP VFAMRGSMHS IQRDMVMLEN
241 QLPLFVLNRL LELQLGTRNQ TGLVAQLAIR FFDPLMPTDE PLTKSGQSKL ENSLARDKSF
301 DPFADMGELH CLDVFRRSLL RSSPKPEPRL TRKRWSRNTR VADKRRQQLI HCVTELKEAG
361 IKFRRRKTDR FWDMQFKNGY LEIPRLLIHD GTKSLFLNLI AFEQCHIDSS NDITSYIIFM
421 DNLIDSHEDV SYLHYCGIIE HWLGSDSEVA DLFNRLCQEV VFDTEDSYLS RLSIEVNRYY
481 DHKWNAWRAT LKHKYFNNPW AIVSFCAAVI LLVLTFSQSF YAVYAYYKPP S
//