LOCUS AEE78600.1 184 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ADP-ribosylation factor-like A1C protein.
ACCESSION CP002686-6906
PROTEIN_ID AEE78600.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ARLA1C"
/locus_tag="AT3G49870"
/gene_synonym="ADP-ribosylation factor-like A1C"
/gene_synonym="ATARLA1C"
/inference="Similar to RNA sequence,
EST:INSD:BP624592.1,INSD:EL074145.1,INSD:EL224184.1,
INSD:EL315188.1,INSD:EL064557.1,INSD:EH869380.1,
INSD:AA650819.1,INSD:EL057607.1,INSD:ES075903.1,
INSD:AV812607.1,INSD:EL052477.1,INSD:EL002195.1,
INSD:EL154160.1,INSD:EH864030.1,INSD:EH828862.1,
INSD:EL336154.1,INSD:EL002504.1,INSD:AV556096.1,
INSD:BP599688.1,INSD:EL032282.1,INSD:EL189003.1,
INSD:BP664771.1,INSD:EL111613.1,INSD:EL177409.1,
INSD:BP600045.1,INSD:BP867896.1,INSD:ES007414.1,
INSD:EL066773.1,INSD:EG479390.1,INSD:BP603479.1,
INSD:AI993099.1,INSD:BP665650.1,INSD:AV811338.1,
INSD:EH832448.1,INSD:BP792262.1,INSD:EL247608.1,
INSD:EL225898.1,INSD:BP856556.1,INSD:BP562254.1,
INSD:BP590537.1,INSD:AA712473.1,INSD:N65618.1,
INSD:EH916960.1,INSD:BP855172.1,INSD:AA394910.1,
INSD:EH809048.1,INSD:BP592214.1,INSD:EH919317.1,
INSD:EL263680.1,INSD:EH955826.1,INSD:EL274826.1,
INSD:EL225073.1,INSD:EL138078.1,INSD:BE528794.1,
INSD:BP583582.1,INSD:BP590857.1,INSD:EL313265.1,
INSD:EL031449.1,INSD:EL149974.1,INSD:EH912902.1,
INSD:EL035234.1,INSD:EL063720.1,INSD:ES155901.1,
INSD:AA394381.1,INSD:EL176939.1,INSD:EH948150.1,
INSD:BP861476.1,INSD:BP646427.1,INSD:ES110986.1,
INSD:BP838572.1,INSD:BP663747.1,INSD:BP635496.1,
INSD:BP563300.1,INSD:ES137172.1,INSD:BP825719.1,
INSD:EL037106.1,INSD:EL159480.1,INSD:DR368599.1,
INSD:BP869112.1,INSD:EH932423.1,INSD:EL228306.1,
INSD:EL118098.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY114718.1,INSD:AY072429.1"
/note="ADP-ribosylation factor-like A1C (ARLA1C);
FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma
membrane, vacuole, cytoplasm; EXPRESSED IN: male
gametophyte, cultured cell, callus, pollen tube; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage;
CONTAINS InterPro DOMAIN/s: Small GTP-binding protein
(InterPro:IPR005225), ARF/SAR superfamily
(InterPro:IPR006689); BEST Arabidopsis thaliana protein
match is: ADP-ribosylation factor-like A1D
(TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins
in 945 species: Archae - 22; Bacteria - 898; Metazoa -
8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other
Eukaryotes - 4293 (source: NCBI BLink)."
/db_xref="TAIR:AT3G49870"
/db_xref="Araport:AT3G49870"
intron_pos 13:2 (1/5)
intron_pos 41:0 (2/5)
intron_pos 52:0 (3/5)
intron_pos 92:2 (4/5)
intron_pos 146:2 (5/5)
BEGIN
1 MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT
61 KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP DNLSVSKSEL HDLLSKTSLN
121 GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS
181 KSKN
//