LOCUS AEE78584.1 737 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-6886
PROTEIN_ID AEE78584.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G49740"
/inference="Similar to RNA sequence,
EST:INSD:ES004022.1,INSD:BE521320.1,INSD:BE521321.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 18 plant
structures; EXPRESSED DURING: 11 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Tetratricopeptide-like helical
(InterPro:IPR011990); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT3G02010.1); Has 46649 Blast hits to 13426
proteins in 218 species: Archae - 0; Bacteria - 21;
Metazoa - 50; Fungi - 114; Plants - 45895; Viruses - 0;
Other Eukaryotes - 569 (source: NCBI BLink)."
/db_xref="TAIR:AT3G49740"
/db_xref="Araport:AT3G49740"
BEGIN
1 MRKALCLTES LSAIAENSTT LLNLNRRLTG LTRSGENRNA LKLFADVHRC TTLRPDQYSV
61 SLAITTARHL RDTIFGGQVH CYAIRSGLLC HSHVSNTLLS LYERLGNLAS LKKKFDEIDE
121 PDVYSWTTLL SASFKLGDIE YAFEVFDKMP ERDDVAIWNA MITGCKESGY HETSVELFRE
181 MHKLGVRHDK FGFATILSMC DYGSLDFGKQ VHSLVIKAGF FIASSVVNAL ITMYFNCQVV
241 VDACLVFEET DVAVRDQVTF NVVIDGLAGF KRDESLLVFR KMLEASLRPT DLTFVSVMGS
301 CSCAAMGHQV HGLAIKTGYE KYTLVSNATM TMYSSFEDFG AAHKVFESLE EKDLVTWNTM
361 ISSYNQAKLG KSAMSVYKRM HIIGVKPDEF TFGSLLATSL DLDVLEMVQA CIIKFGLSSK
421 IEISNALISA YSKNGQIEKA DLLFERSLRK NLISWNAIIS GFYHNGFPFE GLERFSCLLE
481 SEVRILPDAY TLSTLLSICV STSSLMLGSQ THAYVLRHGQ FKETLIGNAL INMYSQCGTI
541 QNSLEVFNQM SEKDVVSWNS LISAYSRHGE GENAVNTYKT MQDEGKVIPD AATFSAVLSA
601 CSHAGLVEEG LEIFNSMVEF HGVIRNVDHF SCLVDLLGRA GHLDEAESLV KISEKTIGSR
661 VDVWWALFSA CAAHGDLKLG KMVAKLLMEK EKDDPSVYVQ LSNIYAGAGM WKEAEETRRA
721 INMIGAMKQR GCSWMRL
//