LOCUS AEE78565.1 591 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pre-mRNA-splicing factor protein.
ACCESSION CP002686-6860
PROTEIN_ID AEE78565.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G49601"
/inference="Similar to RNA sequence,
EST:INSD:EG485956.1,INSD:EL982889.1,INSD:EG510433.1,
INSD:R90395.1,INSD:EG485963.1,INSD:EG485951.1,
INSD:EL009510.1,INSD:AV785493.1,INSD:ES145488.1,
INSD:EG525736.1,INSD:EG485960.1,INSD:EG485962.1,
INSD:EG485965.1,INSD:EL229176.1,INSD:EL070006.1,
INSD:EL195726.1,INSD:EG485957.1,INSD:EG485954.1,
INSD:EG485952.1,INSD:H36794.1,INSD:EH871848.1,
INSD:EG496791.1,INSD:EL203872.1,INSD:EL197227.1,
INSD:EG496792.1,INSD:EG421964.1,INSD:EG510434.1,
INSD:EL224078.1,INSD:EG485959.1,INSD:AV824273.1,
INSD:Z34536.1,INSD:EH875800.1,INSD:EG422008.1,
INSD:EG494608.1,INSD:EG421975.1,INSD:EH956779.1,
INSD:ES039399.1,INSD:EH906017.1,INSD:EG485961.1,
INSD:EG485958.1,INSD:EG485955.1,INSD:AV534414.1,
INSD:DR237520.1,INSD:EG528133.1,INSD:EL164052.1,
INSD:EG528110.1,INSD:Z30824.1,INSD:EG485950.1,
INSD:EG421986.1,INSD:EH988669.1,INSD:EG421997.1,
INSD:BE524659.1,INSD:H76462.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT3G49601"
/db_xref="Araport:AT3G49601"
BEGIN
1 MYNGIGLQTA RGSGTNGYVQ TNKFFVRPRN GGKPVKGGKG FEDDEGTAGL SKKPNKAILE
61 HDRKRQIHLK LAILEDKLAD QGYSDIEIAQ KLEEARVSLE AAAAANEEES DSKVSNTQTH
121 QVAARKEKQM EAFRAALGLP DQQQVAEEGI IDDEPMREGF EGRLKERREH SFLDRDSGRK
181 KVDEDVDEKD AKVKESKKQR GGDDDDVDVV KRHKKKESKK RRHDDSSESD EHGRDRRRRS
241 KKKAKGRKQE SESDSSSSDS ESDSDSDDGK KRGRKKPTKT TKKRSRRKRS VSSESEEVES
301 DDSKKLRKSH KKSLPSNRSG SKELRDKHDE QSRAGRKRHD SDVSEPESED NKQPLRKKEE
361 AYRGGQKQKR DDEDVEADHL KDRYTRDDKK AARDSDDSEI EYQNKKQLRS KVEVYSAGMS
421 QKRKEEEDVT KHGKDKYRSD SRGKEVARDS DDSEAEYENR KKLKNESYQR GRKHKREEDE
481 DNDNHGRDRY RGDDAVKRYG TIKEDDDRYR GRAIEEEGDD DRGRYRPRRE SVKDDEEEYK
541 HGRDRYRGDG RRATGKEDDD DDRVSREREY SSRGRSRYDD SRSSGKRSSH G
//