LOCUS AEE78507.1 850 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-6774
PROTEIN_ID AEE78507.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EMB2261"
/locus_tag="AT3G49170"
/gene_synonym="embryo defective 2261"
/inference="Similar to RNA sequence,
EST:INSD:EH812432.1,INSD:AI995405.1,INSD:EL982064.1,
INSD:ES158572.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY864347.1"
/note="embryo defective 2261 (EMB2261); INVOLVED IN:
embryo development ending in seed dormancy; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT3G57430.1); Has 48732 Blast
hits to 14187 proteins in 273 species: Archae - 0;
Bacteria - 16; Metazoa - 205; Fungi - 147; Plants - 47588;
Viruses - 0; Other Eukaryotes - 776 (source: NCBI BLink)."
/db_xref="TAIR:AT3G49170"
/db_xref="Araport:AT3G49170"
intron_pos 691:1 (1/1)
BEGIN
1 MAMISFSFPS PAKLPIKSQP SVSNRINVAD RLILRHLNAG DLRGAVSALD LMARDGIRPM
61 DSVTFSSLLK SCIRARDFRL GKLVHARLIE FDIEPDSVLY NSLISLYSKS GDSAKAEDVF
121 ETMRRFGKRD VVSWSAMMAC YGNNGRELDA IKVFVEFLEL GLVPNDYCYT AVIRACSNSD
181 FVGVGRVTLG FLMKTGHFES DVCVGCSLID MFVKGENSFE NAYKVFDKMS ELNVVTWTLM
241 ITRCMQMGFP REAIRFFLDM VLSGFESDKF TLSSVFSACA ELENLSLGKQ LHSWAIRSGL
301 VDDVECSLVD MYAKCSADGS VDDCRKVFDR MEDHSVMSWT ALITGYMKNC NLATEAINLF
361 SEMITQGHVE PNHFTFSSAF KACGNLSDPR VGKQVLGQAF KRGLASNSSV ANSVISMFVK
421 SDRMEDAQRA FESLSEKNLV SYNTFLDGTC RNLNFEQAFK LLSEITEREL GVSAFTFASL
481 LSGVANVGSI RKGEQIHSQV VKLGLSCNQP VCNALISMYS KCGSIDTASR VFNFMENRNV
541 ISWTSMITGF AKHGFAIRVL ETFNQMIEEG VKPNEVTYVA ILSACSHVGL VSEGWRHFNS
601 MYEDHKIKPK MEHYACMVDL LCRAGLLTDA FEFINTMPFQ ADVLVWRTFL GACRVHSNTE
661 LGKLAARKIL ELDPNEPAAY IQLSNIYACA GKWEESTEMR RKMKERNLVK EGGCSWIEVG
721 DKIHKFYVGD TAHPNAHQIY DELDRLITEI KRCGYVPDTD LVLHKLEEEN DEAEKERLLY
781 QHSEKIAVAF GLISTSKSRP VRVFKNLRVC GDCHNAMKYI STVSGREIVL RDLNRFHHFK
841 DGKCSCNDYW
//