LOCUS AEE78481.1 523 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA polymerase III subunit RPC82
family protein protein.
ACCESSION CP002686-6740
PROTEIN_ID AEE78481.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G49000"
/inference="Similar to RNA sequence,
EST:INSD:DR349921.1,INSD:ES140345.1,INSD:BX838712.1,
INSD:ES117317.1,INSD:EL991001.1,INSD:ES153408.1,
INSD:BE530750.1,INSD:EL992421.1,INSD:DR349922.1,
INSD:BE529761.1,INSD:DR381296.1,INSD:BP639427.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY085571.1,INSD:AY099634.1,INSD:BT010381.1,
INSD:BX823994.1"
/note="RNA polymerase III subunit RPC82 family protein;
FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA
binding; INVOLVED IN: transcription; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase III subunit RPC82-related,
helix-turn-helix (InterPro:IPR013197), RNA polymerase III
Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast
hits to 257 proteins in 119 species: Archae - 0; Bacteria
- 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0;
Other Eukaryotes - 31 (source: NCBI BLink)."
/db_xref="TAIR:AT3G49000"
/db_xref="Araport:AT3G49000"
intron_pos 25:0 (1/13)
intron_pos 76:1 (2/13)
intron_pos 114:0 (3/13)
intron_pos 138:1 (4/13)
intron_pos 189:0 (5/13)
intron_pos 236:0 (6/13)
intron_pos 267:0 (7/13)
intron_pos 304:1 (8/13)
intron_pos 357:1 (9/13)
intron_pos 370:0 (10/13)
intron_pos 401:0 (11/13)
intron_pos 429:0 (12/13)
intron_pos 480:0 (13/13)
BEGIN
1 MSMSEFGIVY AIHIITVQFG SVVSKVCECL LRKGPLSSRD ISRLAESDIN HNKVKDILYL
61 LIQHNCVQAF SIEPPDGSES KAIVQYIVLF NNILHRVRYN KFSRIVNEEL DSKCGAVLDG
121 LLSNGRLTLG QFIERDRDSG NTIGSEAIRD SLQKLVAARF VERIPSPEPV LGNKEKEPAK
181 RRGAKAAKIL KEPETLEEQV VEAATPVDAI RFPLIFEEDS NSSLADDNSN ITEGKRKQRD
241 VDTSDSSSGV IWRPNFEEFI HRLRHKACVE IVKERRDEGC AIVLRAMLEV GRSQEKKVKT
301 DNSAPMSVGS IYEEVIKTEA GRTMLQERVE ACLDQLSATS SYLPAFVNEV NDSYIVDYKS
361 IISVAQKDEI EAVVMRRYGK EAFRMFRYLS QEGRFVETDK IADAALTEKK DTPQFLLKMW
421 KDGYLHMQKL AVTAPGMYTP FLLWKVNKLI VTTQMLDEMY HASLNLSLRL AHELEAEKEL
481 LLLPLDKLEG PLKERLKKVK AKRLLLSSTM FKLDDAIMLF HDF
//