LOCUS AEE78461.2 519 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tRNA nucleotidyltransferase/polyA
polymerase family protein protein.
ACCESSION CP002686-6710
PROTEIN_ID AEE78461.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G48830"
/inference="Similar to RNA sequence,
EST:INSD:EG470540.1,INSD:ES024569.1,INSD:EH968835.1,
INSD:EH877067.1"
/note="polynucleotide adenylyltransferase family protein /
RNA recognition motif (RRM)-containing protein; FUNCTIONS
IN: polynucleotide adenylyltransferase activity, RNA
binding, nucleotide binding, nucleic acid binding,
nucleotidyltransferase activity; INVOLVED IN: RNA
processing; LOCATED IN: endomembrane system; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 7 growth stages;
CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Poly A polymerase, head domain
(InterPro:IPR002646), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: Polynucleotide adenylyltransferase family
protein (TAIR:AT5G23690.1); Has 11594 Blast hits to 10901
proteins in 2648 species: Archae - 2; Bacteria - 6462;
Metazoa - 1299; Fungi - 748; Plants - 674; Viruses - 8;
Other Eukaryotes - 2401 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48830"
/db_xref="Araport:AT3G48830"
intron_pos 27:0 (1/13)
intron_pos 56:1 (2/13)
intron_pos 89:1 (3/13)
intron_pos 122:0 (4/13)
intron_pos 150:0 (5/13)
intron_pos 194:2 (6/13)
intron_pos 219:0 (7/13)
intron_pos 234:1 (8/13)
intron_pos 271:0 (9/13)
intron_pos 307:0 (10/13)
intron_pos 327:0 (11/13)
intron_pos 347:2 (12/13)
intron_pos 452:0 (13/13)
BEGIN
1 MAVLSVGFFA CRSHFPVLPL FYCFSKVQLN TVAAAMETVD DKDSDHHHDK GSNKTTPEWK
61 KLNSKDLGIT TSMISKPTRI VLNGLKSKGY DVYLVGGCVR DLILKRTPKD FDILTSAELR
121 EVVRSFSRCE IIGKKFPICH VHIGNDMIEV SSFSTSAQNS LRNTRTGSGK SNGSYDEDSI
181 RFNNCLQRDF TINGLMFDPY AKVIYDYLGG IEDIKKAKVR TVFHAGTSFQ EDSARILRGT
241 RIAARLGFTI SKETAHFLKN LSFLVQRLHR GRILLEMNYM LAYGSAEASL RLLWKFGILE
301 ILLPIQAAYL VRTGFKRRDK RSNLLLSLFG NLDKLLAPDK PCHSSLWLTI LALHKALADQ
361 PRYPSVVAAF SLAVHNGGDV LEAVKNTRKV TKPHNRSFFE LLEPEEMDSQ TLLDEVMDFD
421 SSIKEALGQM TDGRFISKAM AAYPQAPYSD MVFIPLQLYL DARRIFECVK ENGQKGFVPK
481 QDSKIDYTSL SSGNLPEVRH VFARVVFDTV FPLNPPQEL
//