LOCUS AEE78458.1 659 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002686-6707
PROTEIN_ID AEE78458.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G48810"
/inference="Similar to RNA sequence, EST:INSD:EH804300.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: C globular stage, petal differentiation and
expansion stage, E expanded cotyledon stage, D bilateral
stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT5G64320.1); Has 54952 Blast
hits to 14329 proteins in 303 species: Archae - 3;
Bacteria - 55; Metazoa - 756; Fungi - 902; Plants - 51480;
Viruses - 0; Other Eukaryotes - 1756 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G48810"
/db_xref="Araport:AT3G48810"
BEGIN
1 MYLKEGCSLL LKVQKPLIPF VLNTNLNVNH LLTESPNHAE IKELDVVKRL RQESCVPLAL
61 HFFKSIANSN LFKHTPLTFE VMIRKLAMDG QVDSVQYLLQ QMKLQGFHCS EDLFISVISV
121 YRQVGLAERA VEMFYRIKEF GCDPSVKIYN HVLDTLLGEN RIQMIYMVYR DMKRDGFEPN
181 VFTYNVLLKA LCKNNKVDGA KKLLVEMSNK GCCPDAVSYT TVISSMCEVG LVKEGRELAE
241 RFEPVVSVYN ALINGLCKEH DYKGAFELMR EMVEKGISPN VISYSTLINV LCNSGQIELA
301 FSFLTQMLKR GCHPNIYTLS SLVKGCFLRG TTFDALDLWN QMIRGFGLQP NVVAYNTLVQ
361 GFCSHGNIVK AVSVFSHMEE IGCSPNIRTY GSLINGFAKR GSLDGAVYIW NKMLTSGCCP
421 NVVVYTNMVE ALCRHSKFKE AESLIEIMSK ENCAPSVPTF NAFIKGLCDA GRLDWAEKVF
481 RQMEQQHRCP PNIVTYNELL DGLAKANRIE EAYGLTREIF MRGVEWSSST YNTLLHGSCN
541 AGLPGIALQL VGKMMVDGKS PDEITMNMII LAYCKQGKAE RAAQMLDLVS CGRRKWRPDV
601 ISYTNVIWGL CRSNCREDGV ILLERMISAG IVPSIATWSV LINCFILDDI VRAHDQFTI
//