LOCUS AEE78415.1 364 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNAse I-like superfamily protein protein.
ACCESSION CP002686-6652
PROTEIN_ID AEE78415.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G48425"
/inference="Similar to RNA sequence,
EST:INSD:EL282620.1,INSD:ES177651.1,INSD:EH835851.1,
INSD:EL141382.1,INSD:ES172870.1,INSD:DR235475.1,
INSD:ES147834.1,INSD:EH961593.1,INSD:ES163585.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT015809.1,INSD:BX823375.1,INSD:BT020215.1,
INSD:BX823190.1"
/note="DNAse I-like superfamily protein; FUNCTIONS IN:
hydrolase activity, nuclease activity; INVOLVED IN: DNA
repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 9 growth stages; CONTAINS
InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase
(InterPro:IPR005135), Exodeoxyribonuclease III xth
(InterPro:IPR004808); BEST Arabidopsis thaliana protein
match is: apurinic endonuclease-redox protein
(TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins
in 1998 species: Archae - 119; Bacteria - 3923; Metazoa -
218; Fungi - 82; Plants - 109; Viruses - 0; Other
Eukaryotes - 1462 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48425"
/db_xref="Araport:AT3G48425"
intron_pos 80:0 (1/8)
intron_pos 111:0 (2/8)
intron_pos 159:1 (3/8)
intron_pos 226:2 (4/8)
intron_pos 253:0 (5/8)
intron_pos 273:2 (6/8)
intron_pos 302:2 (7/8)
intron_pos 337:1 (8/8)
BEGIN
1 MKRFFKPIEK ENSPAAKKPC LSPEKRDGDG DGVEEEKNQN EPSKFMTWNA NSFLLRVKND
61 WSQFSKFVSD FDPDVIAIQE VRMPAAGGKG KPKNHEELSD DTKVLREEKQ ILTRALSSPP
121 FGNYGVWWSL ADSKYAGTAL LVKKCFKPRK VYFNLDKLAS KHEPDGRVIL AEFETFRLLN
181 TYSPNNGWKD EENAFQRRRK WDKRIVEFLN KTSDKPLIWC GDLNVSHEEI DVSHPEFFAT
241 AKLNGYVPPN KEDCGQPGFT PSERGRFGAT IKEGRLVDAY RYLHKEQEME SGFSWSGNPI
301 GKYRGKRMRI DYFLVSEQLK DRIVSCKMHG RGIELEGFHG SDHCPVTLEL SKPSSEMEQN
361 QVSN
//