LOCUS AEE78408.1 645 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Peptidase C78, ubiquitin fold modifier-
specific peptidase 1/ 2 protein.
ACCESSION CP002686-6645
PROTEIN_ID AEE78408.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G48380"
/inference="Similar to RNA sequence,
EST:INSD:AV538636.1,INSD:EL250756.1,INSD:EL987967.1,
INSD:BE524904.1,INSD:BP563289.1,INSD:ES047631.1,
INSD:EG486837.1,INSD:EL083672.1,INSD:AV562063.1,
INSD:ES164185.1,INSD:BP803043.1,INSD:BE521109.1,
INSD:BP806133.1,INSD:AV801221.1,INSD:EG522676.1,
INSD:BX838744.1,INSD:BX837559.1,INSD:BX834467.1,
INSD:EG522184.1,INSD:BE521110.1,INSD:EL209048.1,
INSD:AV533549.1,INSD:EH894206.1,INSD:BE521111.1,
INSD:EL093069.1,INSD:BE038386.1,INSD:ES214610.1,
INSD:EL212186.1,INSD:EH982516.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK226935.1"
/note="Peptidase C78, ubiquitin fold modifier-specific
peptidase 1/ 2; CONTAINS InterPro DOMAIN/s: Peptidase C78,
ubiquitin fold modifier-specific peptidase 1/ 2
(InterPro:IPR012462); Has 331 Blast hits to 329 proteins
in 105 species: Archae - 0; Bacteria - 0; Metazoa - 242;
Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink)."
/db_xref="TAIR:AT3G48380"
/db_xref="Araport:AT3G48380"
intron_pos 59:1 (1/12)
intron_pos 178:1 (2/12)
intron_pos 268:0 (3/12)
intron_pos 297:1 (4/12)
intron_pos 356:0 (5/12)
intron_pos 386:1 (6/12)
intron_pos 427:1 (7/12)
intron_pos 443:1 (8/12)
intron_pos 469:0 (9/12)
intron_pos 498:2 (10/12)
intron_pos 536:0 (11/12)
intron_pos 570:1 (12/12)
BEGIN
1 MVPSSETATV RVLCQKLLLS PNHPGTLQWL IGSPFFPPFT VVSTFRCIHH SPDFQQESDD
61 LRKLLPKGFE VIGGLIIGDS DAEKSAFEAV RAARRLRKHL SEGGELDDEK IVGASCDVGT
121 GTIHFFISKS ENTTKLEPVG SVVYEDKSGK YLWENGCLLH CELPIKLPFY YPASSPSDSK
181 EKFSDAIDAV ITQFKEPYVV YIAETLKKAS GGVPKPVVLR GKDLGFGADA SNINRLPSAD
241 QVSDIKMLSC SHLCLNNKTA PAVNSAENAD KIHISVLLNR SEKLPTSGAP VAEYFPAMEE
301 ARLIVVDLNL DVLTYAPKDL PLMHAVSNLV IPALVDQLYS LKKIILPHLL VEHPQLRIYH
361 FNPPGVLHPI TSMYELNYGE TEMKQVDVRK LLHLRLGLPL DRPLLRIANA LDLSVNDDSK
421 SNMNRRGSTL LKDVHIGIPS SGVSEGVASI IQGSYEYYHY LQDGFDDSGW GCAYRSLQTI
481 ISWFRLQHYT SISVPSHREI QQTLVEIGDK DPSFVGSREW IGAIELSFVL DKLLGVSCKI
541 MNFRSGSELP EKCRELAMHF ENQGTPIMIG GGVLAYTLLG VDYDEGSGDC AFLILDPHYT
601 GSEDHKKIVN GGWCGWKKAV DSKGKSFFLH NKFYNLLLPQ RPNMV
//